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1. Classifying Humpback Whale Calls to Song and Non-Song Vocalizations using Bag of Words Descriptor on Acoustic Data

   https://doi.org/10.1109/ICMLA.2019.00150  

   Mohebbi-Kalkhoran, Hamed ; Zhu, Chenyang ; Schinault, Matthew ; Ratilal, Purnima ( December 2019 , 2019 18th IEEE International Conference On Machine Learning And Applications (ICMLA))

   Humpback whale behavior, population distribution and structure can be inferred from long term underwater passive acoustic monitoring of their vocalizations. Here we develop automatic approaches for classifying humpback whale vocalizations into the two categories of song and non-song, employing machine learning techniques. The vocalization behavior of humpback whales was monitored over instantaneous vast areas of the Gulf of Maine using a large aperture coherent hydrophone array system via the passive ocean acoustic waveguide remote sensing technique over multiple diel cycles in Fall 2006. We use wavelet signal denoising and coherent array processing to enhance the signal-to-noise ratio. To build features vector for every time sequence of the beamformed signals, we employ Bag of Words approach to time-frequency features. Finally, we apply Support Vector Machine (SVM), Neural Networks, and Naive Bayes to classify the acoustic data and compare their performances. Best results are obtained using Mel Frequency Cepstrum Coefficient (MFCC) features and SVM which leads to 94% accuracy and 72.73% F1-score for humpback whale song versus non-song vocalization classification, showing effectiveness of the proposed approach for real-time classification at sea.
2. Bio-acoustic tracking and localization using heterogeneous, scalable microphone arrays

   https://doi.org/10.1038/s42003-021-02746-2  

   Verreycken, Erik ; Simon, Ralph ; Quirk-Royal, Brandt ; Daems, Walter ; Barber, Jesse ; Steckel, Jan ( December 2021 , Communications Biology)

   Abstract Microphone arrays are an essential tool in the field of bioacoustics as they provide a non-intrusive way to study animal vocalizations and monitor their movement and behavior. Microphone arrays can be used for passive localization and tracking of sound sources while analyzing beamforming or spatial filtering of the emitted sound. Studying free roaming animals usually requires setting up equipment over large areas and attaching a tracking device to the animal which may alter their behavior. However, monitoring vocalizing animals through arrays of microphones, spatially distributed over their habitat has the advantage that unrestricted/unmanipulated animals can be observed. Important insights have been achieved through the use of microphone arrays, such as the convergent acoustic field of view in echolocating bats or context-dependent functions of avian duets. Here we show the development and application of large flexible microphone arrays that can be used to localize and track any vocalizing animal and study their bio-acoustic behavior. In a first experiment with hunting pallid bats the acoustic data acquired from a dense array with 64 microphones revealed details of the bats’ echolocation beam in previously unseen resolution. We also demonstrate the flexibility of the proposed microphone array system in a second experiment, wheremore »we used a different array architecture allowing to simultaneously localize several species of vocalizing songbirds in a radius of 75 m. Our technology makes it possible to do longer measurement campaigns over larger areas studying changing habitats and providing new insights for habitat conservation. The flexible nature of the technology also makes it possible to create dense microphone arrays that can enhance our understanding in various fields of bioacoustics and can help to tackle the analytics of complex behaviors of vocalizing animals.« less
3. The Wire Flyer Towed Profiling System

   https://doi.org/10.1175/JTECH-D-17-0180.1  

   Roman, Chris ; Ullman, David S. ; Hebert, Dave ; Licht, Stephen ( February 2019 , Journal of Atmospheric and Oceanic Technology)

   The Wire Flyer towed vehicle is a new platform able to collect high-resolution water column sections. The vehicle is motivated by a desire to effectively capture spatial structures at the submesoscale. The vehicle fills a niche that is not achieved by other existing towed and repeat profiling systems. The Wire Flyer profiles up and down along a ship-towed cable autonomously using controllable wings for propulsion. At ship speeds between 2 and 5 kt (1.02–2.55 m s⁻¹), the vehicle is able to profile over prescribed depth bands down to 1000 m. The vehicle carries sensors for conductivity, temperature, depth, oxygen, turbidity, chlorophyll, pH, and oxidation reduction potential. During normal operations the vehicle is typically commanded to cover vertical regions between 300 and 400 m in height with profiles that repeat at kilometer spacing. The vertical profiling speed can be user specified up to 150 m min⁻¹. The high-density sampling capability at depths below the upper few hundred meters makes the vehicle distinct from other systems. During operations an acoustic modem is used to communicate with the vehicle to provide status information, data samples, and the ability to modify the sampling pattern. This paper provides an overview of the vehicle system, describesmore »its operation, and presents results from several cruises.

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4. Bowhead and beluga whale acoustic detections in the western Beaufort Sea 2008–2018

   https://doi.org/10.1371/journal.pone.0253929  

   Stafford, Kathleen M. ; Citta, John J. ; Okkonen, Stephen R. ; Zhang, Jinlun ( June 2021 , PLOS ONE)

   Halliday, William David (Ed.)

   The Distributed Biological Observatory (DBO) was established to detect environmental changes in the Pacific Arctic by regular monitoring of biophysical responses in each of 8 DBO regions. Here we examine the occurrence of bowhead and beluga whale vocalizations in the western Beaufort Sea acquired by acoustic instruments deployed from September 2008-July 2014 and September 2016-October 2018 to examine inter-annual variability of these Arctic endemic species in DBO Region 6. Acoustic data were collected on an oceanographic mooring deployed in the Beaufort shelfbreak jet at ~71.4°N, 152.0°W. Spectrograms of acoustic data files were visually examined for the presence or absence of known signals of bowhead and beluga whales. Weekly averages of whale occurrence were compared with outputs of zooplankton, temperature and sea ice from the BIOMAS model to determine if any of these variables influenced whale occurrence. In addition, the dates of acoustic whale passage in the spring and fall were compared to annual sea ice melt-out and freeze-up dates to examine changes in phenology. Neither bowhead nor beluga whale migration times changed significantly in spring, but bowhead whales migrated significantly later in fall from 2008–2018. There were no clear relationships between bowhead whales and the environmental variables, suggesting that themore »DBO 6 region is a migratory corridor, but not a feeding hotspot, for this species. Surprisingly, beluga whale acoustic presence was related to zooplankton biomass near the mooring, but this is unlikely to be a direct relationship: there are likely interactions of environmental drivers that result in higher occurrence of both modeled zooplankton and belugas in the DBO 6 region. The environmental triggers that drive the migratory phenology of the two Arctic endemic cetacean species likely extend from Bering Sea transport of heat, nutrients and plankton through the Chukchi and into the Beaufort Sea.« less
5. The Wire Flyer Towed Profiling System

   https://doi.org/DOI: 10.1175/JTECH-D-17-0180.1  

   Roman, C. ; Ullman, D.S. ; Hebert, D. ; Licht, S. ( January 2019 , Journal of atmospheric and oceanic technology)

   The Wire Flyer towed vehicle is a new platform able to collect high-resolution water column sections. The vehicle is motivated by a desire to effectively capture spatial structures at the submesoscale. The vehicle fills a niche that is not achieved by other existing towed and repeat profiling systems. The Wire Flyer profiles up and down along a ship-towed cable autonomously using controllable wings for propulsion. At ship speeds between 2 and 5 kt (1.02–2.55ms21), the vehicle is able to profile over prescribed depth bands down to 1000 m. The vehicle carries sensors for conductivity, temperature, depth, oxygen, turbidity, chlorophyll, pH, and oxidation reduction potential. During normal operations the vehicle is typically commanded to cover vertical regions between 300 and 400min height with profiles that repeat at kilometer spacing. The vertical profiling speed can be user specified up to 150mmin21. The high-density sampling capability at depths below the upper few hundred meters makes the vehicle distinct from other systems. During operations an acoustic modem is used to communicate with the vehicle to provide status information, data samples, and the ability to modify the sampling pattern. This paper provides an overview of the vehicle system, describes its operation, and presents results frommore »several cruises.« less