Machine learning (ML) is transforming all areas of science.The complex and
time-consuming calculations in molecular simulations are particularly suitable
for an ML revolution and have already been profoundly affected by the
application of existing ML methods. Here we review recent ML methods
for molecular simulation, with particular focus on (deep) neural networks
for the prediction of quantum-mechanical energies and forces, on coarse-grained
molecular dynamics, on the extraction of free energy surfaces and
kinetics, and on generative network approaches to sample molecular equilibrium
structures and compute thermodynamics. To explain these methods
and illustrate open methodological problems,we review some important
principles of molecular physics and describe how they can be incorporated
into ML structures. Finally,we identify and describe a list of open challenges
for the interface between ML and molecular simulation.
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Machine Learning for Molecular Simulation
Machine learning (ML) is transforming all areas of science. The complex and time-consuming calculations in molecular simulations are particularly suitable for an ML revolution and have already been profoundly affected by the application of existing ML methods. Here we review recent ML methods for molecular simulation, with particular focus on (deep) neural networks for the prediction of quantum-mechanical energies and forces, on coarse-grained molecular dynamics, on the extraction of free energy surfaces and kinetics, and on generative network approaches to sample molecular equilibrium structures and compute thermodynamics. To explain these methods and illustrate open methodological problems, we review some important principles of molecular physics and describe how they can be incorporated into ML structures. Finally, we identify and describe a list of open challenges for the interface between ML and molecular simulation.
more »
« less
- NSF-PAR ID:
- 10223159
- Date Published:
- Journal Name:
- Annual Review of Physical Chemistry
- Volume:
- 71
- Issue:
- 1
- ISSN:
- 0066-426X
- Page Range / eLocation ID:
- 361 to 390
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
-
Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.1146/annurev-physchem-042018-052331
