skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Modulation of electrophoresis, electroosmosis and diffusion for electrical transport of proteins through a solid-state nanopore
Nanopore probing of molecular level transport of proteins is strongly influenced by electrolyte type, concentration, and solution pH. As a result, electrolyte chemistry and applied voltage are critical for protein transport and impact, for example, capture rate ( C R ), transport mechanism ( i.e. , electrophoresis, electroosmosis or diffusion), and 3D conformation ( e.g. , chaotropic vs. kosmotropic effects). In this study, we explored these using 0.5–4 M LiCl and KCl electrolytes with holo-human serum transferrin (hSTf) protein as the model protein in both low (±50 mV) and high (±400 mV) electric field regimes. Unlike in KCl, where events were purely electrophoretic, the transport in LiCl transitioned from electrophoretic to electroosmotic with decreasing salt concentration while intermediate concentrations ( i.e. , 2 M and 2.5 M) were influenced by diffusion. Segregating diffusion-limited capture rate ( R diff ) into electrophoretic ( R diff,EP ) and electroosmotic ( R diff,EO ) components provided an approach to calculate the zeta-potential of hSTf ( ζ hSTf ) with the aid of C R and zeta potential of the nanopore surface ( ζ pore ) with ( ζ pore – ζ hSTf ) governing the transport mechanism. Scrutinization of the conventional excluded volume model revealed its shortcomings in capturing surface contributions and a new model was then developed to fit the translocation characteristics of proteins.  more » « less
Award ID(s):
2022374 2022398
PAR ID:
10276368
Author(s) / Creator(s):
; ; ; ; ;
Date Published:
Journal Name:
RSC Advances
Volume:
11
Issue:
39
ISSN:
2046-2069
Page Range / eLocation ID:
24398 to 24409
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract Electrolyte chemistry plays an important role in the transport properties of analytes through nanopores. Here, we report the translocation properties of the protein human serum transferrin (hSTf) in asymmetric LiCl salt concentrations with either positive (Ctrans/Ccis< 1) or negative chemical gradients (Ctrans/Ccis> 1). Thecisside concentration was fixed at 4 M for positive chemical gradients and at 0.5 M LiCl for negative chemical gradients, while thetransside concentration varied between 0.5 to 4 M which resulted in six different configurations, respectively, for both positive and negative gradient types. For positive chemical gradient conditions, translocations were observed in all six configurations for at least one voltage polarity whereas with negative gradient conditions, dead concentrations where no events at either polarity were observed. The flux of Li+and Clions and their resultant cation or anion enrichment zones, as well as the interplay of electrophoretic and electroosmotic transport directions, would determine whether hSTf can traverse across the pore. 
    more » « less
  2. Abstract Recently, we developed a fabrication method—chemically‐tuned controlled dielectric breakdown (CT‐CDB)—that produces nanopores (through thin silicon nitride membranes) surpassing legacy drawbacks associated with solid‐state nanopores (SSNs). However, the noise characteristics of CT‐CDB nanopores are largely unexplored. In this work, we investigated the 1/fnoise of CT‐CDB nanopores of varying solution pH, electrolyte type, electrolyte concentration, applied voltage, and pore diameter. Our findings indicate that the bulk Hooge parameter (αb) is about an order of magnitude greater than SSNs fabricated by transmission electron microscopy (TEM) while the surface Hooge parameter (αs) is ∼3 order magnitude greater. Theαsof CT‐CDB nanopores was ∼5 orders of magnitude greater than theirαb, which suggests that the surface contribution plays a dominant role in 1/fnoise. Experiments with DNA exhibited increasing capture rates with pH up to pH ∼8 followed by a drop at pH ∼9 perhaps due to the onset of electroosmotic force acting against the electrophoretic force. The1/fnoise was also measured for several electrolytes and LiCl was found to outperform NaCl, KCl, RbCl, and CsCl. The 1/fnoise was found to increase with the increasing electrolyte concentration and pore diameter. Taken together, the findings of this work suggest the pH approximate 7–8 range to be optimal for DNA sensing with CT‐CDB nanopores. 
    more » « less
  3. AbstractElectrokinetic in-situ recovery is an alternative to conventional mining, relying on the application of an electric potential to enhance the subsurface flow of ions. Understanding the pore-scale flow and ion transport under electric potential is essential for petrophysical properties estimation and flow behavior characterization. The governing physics of electrokinetic transport is electromigration and electroosmotic flow, which depend on the electric potential gradient, mineral occurrence, domain morphology (tortuosity and porosity, grain size and distribution, etc.), and electrolyte properties (local pH distribution and lixiviant type and concentration, etc.). Herein, mineral occurrence and its associated zeta potential are investigated for EK transport. The new Ek model which is designed to solve the EK flow in complex porous media in a highly parallelizable manner includes three coupled equations: (1) Poisson equation, (2) Nernst–Planck equation, and (3) Navier–Stokes equation. These equations were solved using the lattice Boltzmann method within X-ray computed microtomography images. The proposed model is validated against COMSOL multiphysics in a two-dimensional microchannel in terms of fluid flow behavior when the electrical double layer is both resolvable and unresolvable. A more complex chalcopyrite-silica system is then obtained by micro-CT scanning to evaluate the model performance. The effects of mineral occurrence, zeta potential, and electric potential on the three-dimensional chalcopyrite-silica system were evaluated. Although the positive zeta potential of chalcopyrite can induce a flow of ferric ion counter to the direction of electromigration, the net effect is dependent on the occurrence of chalcopyrite. However, the ion flux induced by electromigration was the dominant transport mechanism, whereas advection induced by electroosmosis made a lower contribution. Overall, a pore-scale EK model is proposed for direct simulation on pore-scale images. The proposed model can be coupled with other geochemical models for full physicochemical transport simulations. Meanwhile, electrokinetic transport shows promise as a human-controllable technique because the electromigration of ions and the applied electric potential can be easily controlled externally. Graphical abstract 
    more » « less
  4. We developed a method, by combining electrochemical and electrokinetic streaming current techniques to study ion distribution and ionic conductivity in the diffuse part of electrochemical double layer (EDL) of a metal-electrolyte interface, when potential is applied on the metal by a potentiostat. We applied this method to an electrochemically clean polycrystalline gold (poly Au)-electrolyte interface and measured zeta potential for various applied potentials, pH, and concentration of the electrolyte. Specific adsorption of chloride ions on poly Au was studied by comparing measurements of zeta potential in KCl and KClO4electrolytes. In absence of specific adsorption, zeta potential was found to increase linearly with applied potential, having slope of 0.04–0.06. When Cladsorption occurs, zeta potential changes the sign from positive to negative value at ∼750 mV vs Ag/AgCl applied potential. Complementary cyclic voltammetry and X-ray photoelectron spectroscopy studies were conducted to determine a degree of chloride ion adsorption on a poly Au. A correlation was observed between the applied potential at which zeta potential is zero and potential of zero charge for poly Au. Ion-distribution and ionic conductivity in the diffuse layer were calculated from the measured zeta potential data using nonlinear Poisson-Boltzmann distribution. 
    more » « less
  5. We study the diffusion of multiple electrolytes in a one-dimensional pore. We model the scenario where an electrolyte is in contact with a reservoir of another electrolyte, such that the cation of the two electrolytes is common. The model reveals that several factors influence the ion concentration profiles: (i) relative diffusivities of the ions, (ii) ratio of the electrolyte concentrations in the pore and the reservoir, and (iii) the valence of the ions. We demonstrate that it is crucial to consider the interaction between ion fluxes as treating the electrolytes independently, as is sometimes proposed, does not completely capture the dynamics of ion transport. We validate our numerical predictions by conducting experiments with sodium fluorescein salt in the pore and sodium chloride/sodium sulphate/sodium hydroxide in the reservoir. Our visualization and results demonstrate that ion diffusivities and concentrations in the reservoir can influence the diffusion rates of fluorescein, which underscores that ion fluxes are coupled and that multiple electrolytes cannot be treated independently. These results should be useful to the wide range of situations where concentration variations are imposed on systems with an existing background electrolyte. 
    more » « less