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1. Risk of Facilitated Invasion Depends Upon Invader Identity, Not Environmental Severity, Along an Aridity Gradient

   https://doi.org/10.3389/fevo.2022.886690  

   Lucero, Jacob E.; Faist, Akasha M.; Lortie, Christopher J.; Callaway, Ragan M. (May 2022, Frontiers in Ecology and Evolution)

   Positive interactions can drive the assembly of desert plant communities, but we know little about the species-specificity of positive associations between native shrubs and invasive annual species along aridity gradients. These measures are essential for explaining, predicting, and managing community-level responses to plant invasions and environmental change. Here, we measured the intensity of spatial associations among native shrubs and the annual plant community—including multiple invasive species and their native neighbors—along an aridity gradient across the Mojave and San Joaquin Deserts, United States. Along the gradient, we sampled the abundance and species richness of invasive and native annual species using 180 pairs of shrub and open microsites. Across the gradient, the invasive annuals Bromus madritensis ssp. rubens ( B. rubens ), B. tectorum , B. diandrus, Hordeum murinum , and Brassica tournefortii were consistently more abundant under shrubs than away from shrubs, suggesting positive effects of shrubs on these species. In contrast, abundance of the invasive annual Schismus spp. was greater away from shrubs than under shrubs, suggesting negative effects of shrubs on this species. Similarly, native annual abundance (pooled) and native species richness were greater away from shrubs than under shrubs. Shrub-annual associations were not influenced by shrub size or aridity. Interestingly, we found correlative evidence that B. rubens reduced native abundance (pooled), native species richness, and exotic abundance (pooled) under, but not away from shrubs. We conclude that native shrubs have considerable potential to directly (by increasing invader abundance) and indirectly (by increasing negative impacts of invaders on neighbors) facilitate plant invasions along broad environmental gradients, but these effects may depend more upon invader identity than environmental severity. 

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2. Assessing the accuracy of paired and random sampling for quantifying plant–plant interactions in natural communities

   https://doi.org/10.1002/1438-390x.12161  

   Michalet, Richard; Losapio, Gianalberto; Kikvidze, Zaal; Brooker, Rob W.; Butterfield, Bradley J.; Callaway, Ragan M.; Cavieres, Lohengrin A.; Lortie, Christopher J.; Pugnaire, Francisco I.; Schöb, Christian (July 2023, Population Ecology)

   Abstract Plant interactions in extreme environments are often inferred from spatial associations and quantified by means of paired sampling. Yet, this method might be confounded by habitat‐sharing effects. Here, we address whether paired and random sampling methods provide similar results at varying levels of environmental heterogeneity. We quantified spatial associations with the two methods at three sites that encompass different micro‐environmental heterogeneity and stress levels: Mediterranean environments in Canary Islands, Spain, and Sardinia, Italy, and a cold alpine environment in Hokkaido, Japan. Then, we simulated plant communities with different levels of species micro‐habitat preferences, environmental heterogeneity, and stress levels. We found that differences in species associations between paired and random sampling were indistinguishable from zero in a homogeneous space. When simulating codispersion over a decreasing abundance gradient, both sampling methods correctly identified facilitation and distinguished it from codispersion. Yet, the pairwise method provided higher facilitation estimates than the random one. At each site, there were strong differences between beneficiary species in their spatial association with nurse species, and associations became more positive with increasing stress in Spain. Most importantly, there were no differences in results yielded by the two methods at any of the different stress levels at the Spanish and Japanese sites. At the Italian site, although micro‐environmental heterogeneity was low, we found weakly significant differences between methods that were unlikely due to habitat‐sharing effects. Thus, the paired sampling method can provide significant insights into net and long‐term effects of plant interactions in spatially conspicuous environments. 

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3. Asynchrony of Gambierdiscus spp. Abundance and Toxicity in the U.S. Virgin Islands: Implications for Monitoring and Management of Ciguatera

   https://doi.org/10.3390/toxins13060413  

   Liefer, Justin D.; Richlen, Mindy L.; Smith, Tyler B.; DeBose, Jennifer L.; Xu, Yixiao; Anderson, Donald M.; Robertson, Alison (June 2021, Toxins)

   Ciguatera poisoning (CP) poses a significant threat to ecosystem services and fishery resources in coastal communities. The CP-causative ciguatoxins (CTXs) are produced by benthic dinoflagellates including Gambierdiscus and Fukuyoa spp., and enter reef food webs via grazing on macroalgal substrates. In this study, we report on a 3-year monthly time series in St. Thomas, US Virgin Islands where Gambierdiscus spp. abundance and Caribbean-CTX toxicity in benthic samples were compared to key environmental factors, including temperature, salinity, nutrients, benthic cover, and physical data. We found that peak Gambierdiscus abundance occurred in summer while CTX-specific toxicity peaked in cooler months (February–May) when the mean water temperatures were approximately 26–28 °C. These trends were most evident at deeper offshore sites where macroalgal cover was highest year-round. Other environmental parameters were not correlated with the CTX variability observed over time. The asynchrony between Gambierdiscus spp. abundance and toxicity reflects potential differences in toxin cell quotas among Gambierdiscus species with concomitant variability in their abundances throughout the year. These results have significant implications for monitoring and management of benthic harmful algal blooms and highlights potential seasonal and highly-localized pulses in reef toxin loads that may be transferred to higher trophic levels. 

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4. Predicting climate change impacts on poikilotherms using physiologically guided species abundance models

   https://doi.org/10.1073/pnas.2214199120  

   Wagner, Tyler; Schliep, Erin M.; North, Joshua S.; Kundel, Holly; Custer, Christopher A.; Ruzich, Jenna K.; Hansen, Gretchen J. (April 2023, Proceedings of the National Academy of Sciences)

   Poikilothermic animals comprise most species on Earth and are especially sensitive to changes in environmental temperatures. Species conservation in a changing climate relies upon predictions of species responses to future conditions, yet predicting species responses to climate change when temperatures exceed the bounds of observed data is fraught with challenges. We present a physiologically guided abundance (PGA) model that combines observations of species abundance and environmental conditions with laboratory-derived data on the physiological response of poikilotherms to temperature to predict species geographical distributions and abundance in response to climate change. The model incorporates uncertainty in laboratory-derived thermal response curves and provides estimates of thermal habitat suitability and extinction probability based on site-specific conditions. We show that temperature-driven changes in distributions, local extinction, and abundance of cold, cool, and warm-adapted species vary substantially when physiological information is incorporated. Notably, cold-adapted species were predicted by the PGA model to be extirpated in 61% of locations that they currently inhabit, while extirpation was never predicted by a correlative niche model. Failure to account for species-specific physiological constraints could lead to unrealistic predictions under a warming climate, including underestimates of local extirpation for cold-adapted species near the edges of their climate niche space and overoptimistic predictions of warm-adapted species. 

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5. Linking pathogen–microbiome–host interactions to explain amphibian population dynamics

   https://doi.org/10.1111/mec.16701  

   Torres‐Sánchez, María; Longo, Ana V (November 2022, Molecular Ecology)

   Abstract Symbiotic interactions can determine the evolutionary trajectories of host species, influencing genetic variation through selection and changes in demography. In the context of strong selective pressures such as those imposed by infectious diseases, symbionts providing defences could contribute to increase host fitness upon pathogen emergence. Here, we generated genome‐wide data of an amphibian species to find evidence of evolutionary pressures driven by two skin symbionts: a batrachochytrid fungal pathogen and an antifungal bacterium. Using demographic modelling, we found evidence of decreased effective population size, probably due to pathogen infections. Additionally, we investigated host genetic associations with infection status, antifungal bacterium abundance and overall microbiome diversity using structural equation models. We uncovered relatively lower nucleotide diversity in infected frogs and potential heterozygote advantage to recruit the candidate beneficial symbiont and fight infections. Our models indicate that environmental conditions have indirect effects on symbiont abundance through both host body traits and microbiome diversity. Likewise, we uncovered a potential offsetting effect among host heterozygosity–fitness correlations, plausibly pointing to different ecological and evolutionary processes among the three species due to dynamic interactions. Our findings revealed that evolutionary pressures not only arise from the pathogen but also from the candidate beneficial symbiont, and both interactions shape the genetics of the host. Our results advance knowledge about multipartite symbiotic relationships and provide a framework to model ecological and evolutionary dynamics in wild populations. Finally, our study approach can be applied to inform conservation actions such as bioaugmentation strategies for other imperilled amphibians affected by infectious diseases. 

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