An official website of the United States government
Summary Dead fungal mycelium (necromass) represents a critical component of soil carbon (C) and nutrient cycles. Assessing how the microbial communities associated with decomposing fungal necromass change as global temperatures rise will help in determining how these belowground organic matter inputs contribute to ecosystem responses.In this study, we characterized the structure of bacterial and fungal communities associated with multiple types of decaying mycorrhizal fungal necromass incubated within mesh bags across a 9°C whole ecosystem temperature enhancement in a boreal peatland.We found major taxonomic and functional shifts in the microbial communities present on decaying mycorrhizal fungal necromass in response to warming. These changes were most pronounced in hollow microsites, which showed convergence towards the necromass‐associated microbial communities present in unwarmed hummocks. We also observed a high colonization of ericoid mycorrhizal fungal necromass by fungi from the same genera as the necromass.These results indicate that microbial communities associated with mycorrhizal fungal necromass decomposition are likely to change significantly with future climate warming, which may have strong impacts on soil biogeochemical cycles in peatlands. Additionally, the high enrichment of congeneric fungal decomposers on ericoid mycorrhizal necromass may help to explain the increase in ericoid shrub dominance in warming peatlands.
more »
« less
Microbial necromass response to soil warming: A meta-analysis
Microbial-derived soil organic matter (SOM), or necromass, is an important source of SOM and is sensitive to climate warming. Soil classification systems consider soil physicochemical properties that influence SOM, hinting at the potential utility of incorporating classification systems in soil carbon (C) projections. Currently, there is no consensus on climate warming effects on necromass and if these responses vary across reference soil groups. To estimate the vulnerability of necromass to climate warming, we performed a meta-analysis of publications examining in situ experimental soil warming effects on microbial necromass via amino sugar analysis. We built generalized linear models (GLM) to explore if soil groups and warming methodologies can be used to predict necromass stocks. Our results showed that warming effect sizes on necromass were not uniform across reference soil groups. Specifically, warming effect sizes were generally positive in permafrost soils but negative in calcic soils. However, warming did not significantly change average necromass. Our GLMs detected significant differences in necromass across soil groups with similar texture and clay percentage. Thus, we advocate for further research to define what predictors of necromass are captured in soil group but not in soil texture. We also show warming methodology is a significant predictor of necromass, depending on the necromass biomarker. Future research efforts should uncover the mechanistic reason behind how passive versus active warming methodology influences necromass responses. Our study highlights the need for more in situ soil warming experiments measuring microbial necromass as this will improve predictions of SOM feedback under future climate scenarios.
more »
« less
- PAR ID:
- 10395510
- Date Published:
- Journal Name:
- Frontiers in Soil Science
- Volume:
- 2
- ISSN:
- 2673-8619
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Abstract Climate change may alter soil microbial communities and soil organic matter (SOM) composition. Soil carbon (C) cycling takes place over multiple time scales; therefore, long-term studies are essential to better understand the factors influencing C storage and help predict responses to climate change. To investigate this further, soils that were heated by 5 °C above ambient soil temperatures for 18 years were collected from the Barre Woods Soil Warming Study at the Harvard Forest Long-term Ecological Research site. This site consists of large 30 × 30 m plots (control or heated) where entire root systems are exposed to sustained warming conditions. Measurements included soil C and nitrogen concentrations, microbial biomass, and SOM chemistry using gas chromatography–mass spectrometry and solid-state13C nuclear magnetic resonance spectroscopy. These complementary techniques provide a holistic overview of all SOM components and a comprehensive understanding of SOM composition at the molecular-level. Our results showed that soil C concentrations were not significantly altered with warming; however, various molecular-level alterations to SOM chemistry were observed. We found evidence for both enhanced SOM decomposition and increased above-ground plant inputs with long-term warming. We also noted shifts in microbial community composition while microbial biomass remained largely unchanged. These findings suggest that prolonged warming induced increased availability of preferred substrates, leading to shifts in the microbial community and SOM biogeochemistry. The observed increase in gram-positive bacteria indicated changes in substrate availability as gram-positive bacteria are often associated with the decomposition of complex organic matter, while gram-negative bacteria preferentially break down simpler organic compounds altering SOM composition over time. Our results also highlight that additional plant inputs do not effectively offset chronic warming-induced SOM decomposition in temperate forests.more » « less
-
ABSTRACT Labile carbon (C) inputs in soils are expected to increase in the future due to global change drivers such as elevated atmospheric CO2concentrations or warming and potential increases in plant primary productivity. However, the role of mycorrhizal association in modulating microbial activity and soil organic matter (SOM) biogeochemistry responses to increasing below‐ground C inputs remains unclear. We employed18O–H2O quantitative stable isotope probing to investigate the effects of synthetic root exudate addition (0, 250, 500, and 1000 μg C g soil−1) on bacterial growth traits and SOM biogeochemistry in rhizosphere soils of trees associated with arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) fungi. Soil respiration increased proportionally to the amount of exudate addition in both AM and ECM soils. However, microbial biomass C (MBC) responses differed, increasing in AM and decreasing in ECM soils. In AM soils, exudate addition increased taxon‐specific and community‐wide relative growth rates of bacteria, leading to enhanced biomass production. Conversely, in ECM soils, relative growth rates were less responsive to exudate addition, and estimates of MBC mortality increased with increasing exudate addition. In the AM soils, aggregated bacterial growth traits were predictive of soil respiration, but this relationship was not observed in ECM soils, perhaps due to substantial MBC mortality. These findings highlight the distinct responses of bacterial communities in AM and ECM rhizosphere soils to exudate addition. Considering that microbial products contribute to the formation of stable soil organic carbon (SOC) pools, future increases in labile exudate release in response to global change may consequently lead to greater SOC gains in AM soils compared to ECM soils.more » « less
-
null (Ed.)Soil organic matter (SOM) stocks, decom- position and persistence are largely the product of controls that act locally. Yet the controls are shaped and interact at multiple spatiotemporal scales, from which macrosystem patterns in SOM emerge. Theory on SOM turnover recognizes the resulting spatial and temporal conditionality in the effect sizes of controls that play out across macrosystems, and couples them through evolutionary and community assembly pro- cesses. For example, climate history shapes plant functional traits, which in turn interact with contem- porary climate to influence SOM dynamics. Selection and assembly also shape the functional traits of soil decomposer communities, but it is less clear how in turn these traits influence temporal macrosystem patterns in SOM turnover. Here, we review evidence that establishes the expectation that selection and assembly should generate decomposer communities across macrosystems that have distinct functional effects on SOM dynamics. Representation of this knowledge in soil biogeochemical models affects the magnitude and direction of projected SOM responses under global change. Yet there is high uncertainty and low confidence in these projections. To address these issues, we make the case that a coordinated set of empirical practices are required which necessitate (1) greater use of statistical approaches in biogeochem- istry that are suited to causative inference; (2) long- term, macrosystem-scale, observational and experi- mental networks to reveal conditionality in effect sizes, and embedded correlation, in controls on SOM turnover; and (3) use of multiple measurement grains to capture local- and macroscale variation in controls and outcomes, to avoid obscuring causative understanding through data aggregation. When employed together, along with process-based models to synthesize knowledge and guide further empirical work, we believe these practices will rapidly advance understanding of microbial controls on SOM and improve carbon cycle projections that guide policies on climate adaptation and mitigation.more » « less
-
Wolfe, Benjamin E (Ed.)ABSTRACT Microbial necromass contributes significantly to both soil carbon (C) persistence and ecosystem nitrogen (N) availability, but quantitative estimates of C and N movement from necromass into soils and decomposer communities are lacking. Additionally, while melanin is known to slow fungal necromass decomposition, how it influences microbial C and N acquisition as well as elemental release into soils remains unclear. Here, we tracked decomposition of isotopically labeled low and high melanin fungal necromass and measured13C and15N accumulation in surrounding soils and microbial communities over 77 d in a temperate forest in Minnesota, USA. Mass loss was significantly higher from low melanin necromass, corresponding with greater13C and15N soil inputs. A taxonomically and functionally diverse array of bacteria and fungi was enriched in13C and/or15N at all sampling points, with enrichment being consistently higher on low melanin necromass and earlier in decomposition. Similar patterns of preferential C and N enrichment of many bacterial and fungal genera early in decomposition suggest that both microbial groups co-contribute to the rapid assimilation of resource-rich soil organic matter inputs. While overall richness of taxa enriched in C was higher than in N for both bacteria and fungi, there was a significant positive relationship between C and N in co-enriched taxa. Collectively, our results demonstrate that melanization acts as a key ecological trait mediating not only fungal necromass decomposition rate but also necromass C and N release and that both elements are rapidly co-utilized by diverse bacterial and fungal decomposers in natural settings. IMPORTANCERecent studies indicate that microbial dead cells, particularly those of fungi, play an important role in long-term carbon persistence in soils. Despite this growing recognition, how the resources within dead fungal cells (also known as fungal necromass) move into decomposer communities and soils are poorly quantified, particularly in studies based in natural environments. In this study, we found that the contribution of fungal necromass to soil carbon and nitrogen availability was slowed by the amount of melanin present in fungal cell walls. Further, despite the overall rapid acquisition of carbon and nitrogen from necromass by a diverse range of both bacteria and fungi, melanization also slowed microbial uptake of both elements. Collectively, our results indicate that melanization acts as a key ecological trait mediating not only fungal necromass decomposition rate, but also necromass carbon and nitrogen release into soil as well as microbial resource acquisition.more » « less
- Free Publicly Accessible Full Text
-
Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.3389/fsoil.2022.987178
