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1. Approaches to understanding echinoderm origins. Part 2: Questioning conceptual models

   Mooi, R; Lefebvre, B; Guensburg, T; Nohejlova, M; Dupichaud, C (December 2024, Cahiers de Biologie Marine)

   Davoult, D (Ed.)

   Abstract: The two main approaches in interpreting the significance of non-radial fossil echinoderms (carpoids) have consistently produced the same two distinct clusters of results for over a century of investigation. Studies based on conceptual models imbued with Haeckelian precepts consider bilaterally symmetric or asymmetric morphologies of carpoids plesiomorphic for the phylum. These approaches do not find a place for carpoids within an existing phylogenetic framework for the phylum because it is assumed that they primitively lack pentaradiality. Emphasis on differences between these taxa and pentaradial echinoderms forces them outside of and downward from more crownward clades. It is crucial to examine the data supporting these supposed differences. Is it worth considering non-pentaradial echinoderms as members of a well-known group of echinoderms, the blastozoans, which already includes many secondarily-derived, non-pentaradial members? Followers of an empirical model think so, presenting an integration of paleontology, embryology, body wall homology, and image analysis that derives echinoderms from a bilaterian, archimeric larva, not bilateral adults. Unprecedented modification of a single mesocoel (hydrocoel) initiated the pentaradial adult echinoderm, most parsimoniously with five primary lobes in stem forms of each major clade within the phylum. The unique water vascular system led to rearrangement of adult axes that literally have no parallel with those of any other invertebrate, representing an iconic synapomorphy for the Echinodermata. There are few, if any, developmental or stratigraphic data defending carpoids as 'bilateral precursors'. Their free appendage is now shown to be an ambulacrum, undermining any supposition of a 'head', 'tail', or 'gill slits'. Pentaradiality is plesiomorphic for the phylum, obviating the requirement for a triradial intermediate (helicoplacoids) between carpoids and pentaradial forms. Carpoids, a subset of blastozoans, exploited motility as a feeding mode, leading to extraordinary adaptations that belie their interpretation as ancestral echinoderms. 

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2. Ecological novelty at the start of the Cambrian and Ordovician radiations of echinoderms

   https://doi.org/10.1111/pala.12688  

   Novack‐Gottshall, Philip M.; Purcell, Jack; Sultan, Ali; Ranjha, Isa; Deline, Bradley; Sumrall, Colin D. (January 2024, Palaeontology)

   Abstract The Cambrian and Ordovician radiations marked the origins of all major echinoderm clades and established their Phanerozoic ecological blueprint. Recent claims of modest innovation of early echinoderms and other animals suggest constraints on novelty during the origins of phyla. Here, we document the life‐habit richness, body size, tiering, habitat usage, mobility, diet and foraging habits of 366 Cambrian–Ordovician echinoderm genera across a time‐scaled phylogeny to identify the timing and impact of novelty. Most early echinoderms were sedentary, filter‐feeding microbivores, and their body sizes, diets and modes of locomotion were largely unchanged through time, despite major volatility in taxonomic composition. Cambrian echinoderms lived close to the seafloor, with stylophorans first evolving semi‐infaunality. Many Ordovician echinoderms lived farther from the seafloor, with more complex filter‐feeding organs and tiering structure, often using other organisms as substrates. Mobile carnivores and mass‐feeders emerge then, too, across diverse asterozoans and echinozoans. Most of these novelties coincide with the origins of individual clades during the early and late Cambrian (Terreneuvian/Series 2 and Furongian), and 10–20 million years pass before most become ecologically important. Life‐habit evolution within most taxa involved new variations in these traits, with crinoids and asterozoans better able to shift strategies. The Ordovician radiation records more new variability in pre‐existing Cambrian life habits rather than radical re‐invention, with important novelties (like mobile carnivory and mass‐feeding, increased height off the seafloor, and biotic substrates) becoming ecologically more impactful. Taxa with these strategies were those best able to capitalize on the newly heterogeneous Ordovician world. 

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3. Massive black hole binary inspiral and spin evolution in a cosmological framework

   https://doi.org/10.1093/mnras/staa3826  

   Sayeb, Mohammad; Blecha, Laura; Kelley, Luke Zoltan; Gerosa, Davide; Kesden, Michael; Thomas, July (January 2021, Monthly Notices of the Royal Astronomical Society)

   null (Ed.)

   ABSTRACT Massive black hole (MBH) binary inspiral time-scales are uncertain, and their spins are even more poorly constrained. Spin misalignment introduces asymmetry in the gravitational radiation, which imparts a recoil kick to the merged MBH. Understanding how MBH binary spins evolve is crucial for determining their recoil velocities, their gravitational wave (GW) waveforms detectable with Laser Interferometer Space Antenna, and their retention rate in galaxies. Here, we introduce a sub-resolution model for gas- and gravitational wave (GW)-driven MBH binary spin evolution using accreting MBHs from the Illustris cosmological hydrodynamic simulations. We also model binary inspiral via dynamical friction, stellar scattering, viscous gas drag, and GW emission. Our model assumes that the circumbinary disc always removes angular momentum from the binary. It also assumes differential accretion, which causes greater alignment of the secondary MBH spin in unequal-mass mergers. We find that 47 per cent of the MBHs in our population merge by z = 0. Of these, 19 per cent have misaligned primaries and 10 per cent have misaligned secondaries at the time of merger in our fiducial model with initial eccentricity of 0.6 and accretion rates from Illustris. The MBH misalignment fraction depends strongly on the accretion disc parameters, however. Reducing accretion rates by a factor of 100, in a thicker disc, yields 79 and 42 per cent misalignment for primaries and secondaries, respectively. Even in the more conservative fiducial model, more than 12 per cent of binaries experience recoils of >500 km s−1, which could displace them at least temporarily from galactic nuclei. We additionally find that a significant number of systems experience strong precession. 

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4. Re‐description of the early Triassic diapsid Palacrodon from the lower Fremouw formation of Antarctica

   https://doi.org/10.1111/joa.13770  

   Jenkins, Kelsey M; Meyer, Dalton L; Lewis, Patrick J; Choiniere, Jonah N; Bhullar, Bhart‐Anjan S (December 2022, Journal of Anatomy)

   Abstract The rapid radiation and dispersal of crown reptiles following the end‐Permian mass extinction characterizes the earliest phase of the Mesozoic. Phylogenetically, this early radiation is difficult to interpret, with polytomies near the crown node, long ghost lineages, and enigmatic origins for crown group clades. Better understanding of poorly known taxa from this time can aid in our understanding of this radiation and Permo‐Triassic ecology. Here, we describe an Early Triassic specimen of the diapsidPalacrodonfrom the Fremouw Formation of Antarctica. WhilePalacrodonis known throughout the Triassic and exhibits a cosmopolitan geographic range, little is known of its evolutionary relationships. We recoverPalacrodonoutside of crown reptiles (Sauria) but more crownward thanYoungina capensisand other late Permian diapsids. Furthermore,Palacrodonpossesses anatomical features that add clarity to the evolution of the stapes within the reptilian lineage, as well as incipient adaptations for arboreality and herbivory during the earliest phases of the Permo–Triassic recovery. 

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5. Monophyletic Origin and Divergent Evolution of Animal Telomerase RNA

   https://doi.org/10.1093/molbev/msaa203  

   Logeswaran, Dhenugen; Li, Yang; Podlevsky, Joshua D; Chen, Julian J (August 2020, Molecular Biology and Evolution)

   Wittkopp, Patricia (Ed.)

   Abstract Telomerase RNA (TR) is a noncoding RNA essential for the function of telomerase ribonucleoprotein. TRs from vertebrates, fungi, ciliates, and plants exhibit extreme diversity in size, sequence, secondary structure, and biogenesis pathway. However, the evolutionary pathways leading to such unusual diversity among eukaryotic kingdoms remain elusive. Within the metazoan kingdom, the study of TR has been limited to vertebrates and echinoderms. To understand the origin and evolution of TR across the animal kingdom, we employed a phylogeny-guided, structure-based bioinformatics approach to identify 82 novel TRs from eight previously unexplored metazoan phyla, including the basal-branching sponges. Synthetic TRs from two representative species, a hemichordate and a mollusk, reconstitute active telomerase in vitro with their corresponding telomerase reverse transcriptase components, confirming that they are authentic TRs. Comparative analysis shows that three functional domains, template-pseudoknot (T-PK), CR4/5, and box H/ACA, are conserved between vertebrate and the basal metazoan lineages, indicating a monophyletic origin of the animal TRs with a snoRNA-related biogenesis mechanism. Nonetheless, TRs along separate animal lineages evolved with divergent structural elements in the T-PK and CR4/5 domains. For example, TRs from echinoderms and protostomes lack the canonical CR4/5 and have independently evolved functionally equivalent domains with different secondary structures. In the T-PK domain, a P1.1 stem common in most metazoan clades defines the template boundary, which is replaced by a P1-defined boundary in vertebrates. This study provides unprecedented insight into the divergent evolution of detailed TR secondary structures across broad metazoan lineages, revealing ancestral and later-diversified elements. 

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