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1. Novel microbial community composition and carbon biogeochemistry emerge over time following saltwater intrusion in wetlands

   https://doi.org/10.1111/gcb.14486  

   Dang, Chansotheary ; Morrissey, Ember M. ; Neubauer, Scott C. ; Franklin, Rima B. ( December 2018 , Global Change Biology)

   Sea level rise and changes in precipitation can cause saltwater intrusion into historically freshwater wetlands, leading to shifts in microbial metabolism that alter greenhouse gas emissions and soil carbon sequestration. Saltwater intrusion modifies soil physicochemistry and can immediately affect microbial metabolism, but further alterations to biogeochemical processing can occur over time as microbial communities adapt to the changed environmental conditions. To assess temporal changes in microbial community composition and biogeochemical activity due to saltwater intrusion, soil cores were transplanted from a tidal freshwater marsh to a downstream mesohaline marsh and periodically sampled over 1 year. This experimental saltwater intrusion produced immediate changes in carbon mineralization rates, whereas shifts in the community composition developed more gradually. Salinity affected the composition of the prokaryotic community but did not exert a strong influence on the community composition of fungi. After only 1 week of saltwater exposure, carbon dioxide production doubled and methane production decreased by three orders of magnitude. By 1 month, carbon dioxide production in the transplant was comparable to the saltwater controls. Over time, we observed a partial recovery in methane production which strongly correlated with an increase in the relative abundance of three orders of hydrogenotrophic methanogens. Taken together, our results suggest that ecosystem responses to saltwater intrusion are dynamic over time as complex interactions develop between microbial communities and the soil organic carbon pool. The gradual changes in microbial community structure we observed suggest that previously freshwater wetlands may not experience an equilibration of ecosystem function until long after initial saltwater intrusion. Our results suggest that during this transitional period, likely lasting years to decades, these ecosystems may exhibit enhanced greenhouse gas production through greater soil respiration and continued methanogenesis.

    

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2. Modeling net ecosystem carbon balance and loss in coastal wetlands exposed to sea‐level rise and saltwater intrusion

   https://doi.org/10.1002/eap.2702  

   Ishtiaq, Khandker S. ; Troxler, Tiffany G. ; Lamb‐Wotton, Lukas ; Wilson, Benjamin J. ; Charles, Sean P. ; Davis, Stephen E. ; Kominoski, John S. ; Rudnick, David T. ; Sklar, Fred H. ( January 2022 , Ecological Applications)

   Coastal wetlands are globally important stores of carbon (C). However, accelerated sea-level rise (SLR), increased saltwater intrusion, and modified freshwater discharge can contribute to the collapse of peat marshes, converting coastal peatlands into open water. Applying results from multiple experiments from sawgrass (Cladium jamaicense)-dominated freshwater and brackish water marshes in the Florida Coastal Everglades, we developed a system-level mechanistic peat elevation model (EvPEM). We applied the model to simulate net ecosystem C balance (NECB) and peat elevation in response to elevated salinity under inundation and drought exposure. Using a mass C balance approach, we estimated net gain in C and corresponding export of aquatic fluxes ( ) in the freshwater marsh under ambient conditions (NECB = 1119 ± 229 gC m−2 year−1; FAQ = 317 ± 186 gC m−2 year−1). In contrast, the brackish water marsh exhibited substantial peat loss and aquatic C export with ambient (NECB = −366 ± 15 gC m−2 year−1; FAQ = 311 ± 30 gC m−2 year−1) and elevated salinity (NECB = −594 ± 94 gC m−2 year−1; FAQ = 729 ± 142 gC m−2 year−1) under extended exposed conditions. Further, mass balance suggests a considerable decline in soil C and corresponding elevation loss with elevated salinity and seasonal dry-down. Applying EvPEM, we developed critical marsh net primary productivity (NPP) thresholds as a function of salinity to simulate accumulating, steady-state, and collapsing peat elevations. The optimization showed that ~150–1070 gC m−2 year−1 NPP could support a stable peat elevation (elevation change ≈ SLR), with the corresponding salinity ranging from 1 to 20 ppt under increasing inundation levels. The C budgeting and modeling illustrate the impacts of saltwater intrusion, inundation, and seasonal dry-down and reduce uncertainties in understanding the fate of coastal peat wetlands with SLR and freshwater restoration. The modeling results provide management targets for hydrologic restoration based on the ecological conditions needed to reduce the vulnerability of the Everglades' peat marshes to collapse. The approach can be extended to other coastal peatlands to quantify C loss and improve understanding of the influence of the biological controls on wetland C storage changes for coastal management. 

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3. Sea-Level Rise and the Persistence of Tree Islands in Coastal Landscapes

   https://doi.org/10.1007/s10021-021-00673-1  

   Ross, Michael S. ; Stoffella, Susana L. ; Vidales, Rosario ; Meeder, John F. ; Kadko, David C. ; Scinto, Leonard J. ; Subedi, Suresh C. ; Redwine, Jed R. ( January 2021 , Ecosystems)

   null (Ed.)

   Naturally formed forest patches known as tree islands are found within lower-statured wetland matrices throughout the world, where they contrast sharply with the surrounding vegetation. In some coastal wetlands they are embedded in former freshwater marshes that are currently exposed to saltwater intrusion and mangrove encroachment associated with accelerating sea-level rise. In this study we resurveyed tree composition and determined environmental conditions in tree islands of the coastal Florida Everglades that had been examined two decades earlier. We asked whether tree islands in this coastal transition zone were differentiated geomorphologically as well as compositionally, and whether favorable geomorphology enabled coastal forest type(s) to maintain their compositional integrity against rising seas. Patterns of variation in geomorphology and soils among forest types were evident, but were dwarfed by differences between forest and adjacent wetlands. Tree island surfaces were elevated by 12–44 cm, and 210Pb analyses indicated that their current rates of vertical accretion were more rapid than those of surrounding ecosystems. Tree island soils were deeper and more phosphorus-rich than in the adjoining matrix. Salinity decreased interiorward in both tree island and marsh, but porewater was fresher in forest than marsh in Mixed Swamp Forest, midway along the coastal gradient where tropical hardwoods were most abundant. Little decrease in the abundance of tropical hardwood species nor increase in halophytes was observed during the study period. Our data suggest that geomorphological differences between organic tree island and marl marsh, perhaps driven by groundwater upwelling through more transmissive tree island soils, contributed to the forests’ compositional stability, though this stasis may be short-lived despite management efforts. 

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4. Salinity Impacts the Functional mcrA and dsrA Gene Abundances in Everglades Marshes

   https://doi.org/10.3390/microorganisms11051180  

   Jordan, Deidra S. ; Kominoski, John ; Servais, Shelby ; Mills, DeEtta ( May 2023 , Microorganisms)

   Coastal wetlands, such as the Everglades, are increasingly being exposed to stressors that have the potential to modify their existing ecological processes because of global climate change. Their soil microbiomes include a population of organisms important for biogeochemical cycling, but continual stresses can disturb the community’s composition, causing functional changes. The Everglades feature wetlands with varied salinity levels, implying that they contain microbial communities with a variety of salt tolerances and microbial functions. Therefore, tracking the effects of stresses on these populations in freshwater and brackish marshes is critical. The study addressed this by utilizing next generation sequencing (NGS) to construct a baseline soil microbial community. The carbon and sulfur cycles were studied by sequencing a microbial functional gene involved in each process, the mcrA and dsrA functional genes, respectively. Saline was introduced over two years to observe the taxonomic alterations that occurred after a long-term disturbance such as seawater intrusion. It was observed that saltwater dosing increased sulfite reduction in freshwater peat soils and decreased methylotrophy in brackish peat soils. These findings add to the understanding of microbiomes by demonstrating how changes in soil qualities impact communities both before and after a disturbance such as saltwater intrusion. 

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5. Intrinsic and extrinsic drivers of organic matter processing along phosphorus and salinity gradients in coastal wetlands

   https://doi.org/10.1111/1365-2745.14302  

   Anderson, Kenneth J. ; Kominoski, John S. ; Sah, Jay P. ( March 2024 , Journal of Ecology)

   Climate change is accelerating sea‐level rise and saltwater intrusion in coastal regions world‐wide and interacting with large‐scale changes in species composition in coastal wetlands. Quantifying macrophyte litter breakdown along freshwater‐to‐marine coastal gradients is needed to predict how carbon stores will respond to shifts in both macrophyte communities and water chemistry under changing environmental conditions.

   To test the interactive drivers of changing species identity and water chemistry, we performed a reciprocal transplant of four macrophyte litter species in seven sites along freshwater‐to‐marine gradients in the Florida Coastal Everglades. We measured surface water chemistry (dissolved organic carbon, total nitrogen and total phosphorus), litter chemistry (% nitrogen, % phosphorus, change in N:P molar ratio, % cellulose and % lignin as proxies for recalcitrance) and litter breakdown rates (k/degree‐day).

   Direct effects of salinity and surface water nutrients were the strongest drivers ofk, but unexpectedly, litter chemistry did not correlate with litterk. However, salinity strongly correlated with changes in litter chemistry, whereby litter incubated in brackish and marine wetlands was more labile and gained more phosphorus compared with litter in freshwater marshes. Our results suggest that litterkin coastal wetlands is explained by species‐specific interactions among water and litter chemistries. Water nutrient availability was an important predictor of breakdown rates across species, but breakdown rates were only explained by the carbon recalcitrance of litter in the species with the slowest breakdown (Cladium jamaicense), indicating the importance of carbon structure, and species identity on breakdown rates.

   Synthesis. In oligotrophic ecosystems, nutrients are often the primary driver of organic matter breakdown. However, we found that variation in macrophyte breakdown rates in oligotrophic coastal wetlands was also explained by salinity and associated seawater chemistry, emphasising the need to understand how saltwater intrusion will alter organic matter processing in wetlands. Our results suggest that marine subsidies associated with sea‐level rise have the potential to accelerate leaf litter breakdown. The increase in breakdown rates could either be buffered or increase further as sea‐level rise also shifts macrophyte community composition to more or less recalcitrant species.

    

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