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1. A Within-Group Approach to Ensemble Machine Learning Methods for Causal Inference in Multilevel Studies

   https://doi.org/10.3102/10769986231162096  

   Suk, Youmi (February 2024, Journal of Educational and Behavioral Statistics)

   Machine learning (ML) methods for causal inference have gained popularity due to their flexibility to predict the outcome model and the propensity score. In this article, we provide a within-group approach for ML-based causal inference methods in order to robustly estimate average treatment effects in multilevel studies when there is cluster-level unmeasured confounding. We focus on one particular ML-based causal inference method based on the targeted maximum likelihood estimation (TMLE) with an ensemble learner called SuperLearner. Through our simulation studies, we observe that training TMLE within groups of similar clusters helps remove bias from cluster-level unmeasured confounders. Also, using within-group propensity scores estimated from fixed effects logistic regression increases the robustness of the proposed within-group TMLE method. Even if the propensity scores are partially misspecified, the within-group TMLE still produces robust ATE estimates due to double robustness with flexible modeling, unlike parametric-based inverse propensity weighting methods. We demonstrate our proposed methods and conduct sensitivity analyses against the number of groups and individual-level unmeasured confounding to evaluate the effect of taking an eighth-grade algebra course on math achievement in the Early Childhood Longitudinal Study. 

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2. Propensity Score Weighting for Causal Inference with Clustered Data

   https://doi.org/10.1515/jci-2017-0027  

   Yang, Shu (September 2018, Journal of Causal Inference)

   Abstract Propensity score weighting is a tool for causal inference to adjust for measured confounders in observational studies. In practice, data often present complex structures, such as clustering, which make propensity score modeling and estimation challenging. In addition, for clustered data, there may be unmeasured cluster-level covariates that are related to both the treatment assignment and outcome. When such unmeasured cluster-specific confounders exist and are omitted in the propensity score model, the subsequent propensity score adjustment may be biased. In this article, we propose a calibration technique for propensity score estimation under the latent ignorable treatment assignment mechanism, i. e., the treatment-outcome relationship is unconfounded given the observed covariates and the latent cluster-specific confounders. We impose novel balance constraints which imply exact balance of the observed confounders and the unobserved cluster-level confounders between the treatment groups. We show that the proposed calibrated propensity score weighting estimator is doubly robust in that it is consistent for the average treatment effect if either the propensity score model is correctly specified or the outcome follows a linear mixed effects model. Moreover, the proposed weighting method can be combined with sampling weights for an integrated solution to handle confounding and sampling designs for causal inference with clustered survey data. In simulation studies, we show that the proposed estimator is superior to other competitors. We estimate the effect of School Body Mass Index Screening on prevalence of overweight and obesity for elementary schools in Pennsylvania. 

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3. An instrumental variable method for point processes: generalized Wald estimation based on deconvolution

   https://doi.org/10.1093/biomet/asad005  

   Jiang, Zhichao; Chen, Shizhe; Ding, Peng (January 2023, Biometrika)

   Summary Point processes are probabilistic tools for modelling event data. While there exists a fast-growing literature on the relationships between point processes, how such relationships connect to causal effects remains unexplored. In the presence of unmeasured confounders, parameters from point process models do not necessarily have causal interpretations. We propose an instrumental variable method for causal inference with point process treatment and outcome. We define causal quantities based on potential outcomes and establish nonparametric identification results with a binary instrumental variable. We extend the traditional Wald estimation to deal with point process treatment and outcome, showing that it should be performed after a Fourier transform of the intention-to-treat effects on the treatment and outcome, and thus takes the form of deconvolution. We refer to this approach as generalized Wald estimation and propose an estimation strategy based on well-established deconvolution methods. 

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4. Causal inference with invalid instruments: post-selection problems and a solution using searching and sampling

   https://doi.org/10.1093/jrsssb/qkad049  

   Guo, Zijian (May 2023, Journal of the Royal Statistical Society Series B: Statistical Methodology)

   Abstract Instrumental variable methods are among the most commonly used causal inference approaches to deal with unmeasured confounders in observational studies. The presence of invalid instruments is the primary concern for practical applications, and a fast-growing area of research is inference for the causal effect with possibly invalid instruments. This paper illustrates that the existing confidence intervals may undercover when the valid and invalid instruments are hard to separate in a data-dependent way. To address this, we construct uniformly valid confidence intervals that are robust to the mistakes in separating valid and invalid instruments. We propose to search for a range of treatment effect values that lead to sufficiently many valid instruments. We further devise a novel sampling method, which, together with searching, leads to a more precise confidence interval. Our proposed searching and sampling confidence intervals are uniformly valid and achieve the parametric length under the finite-sample majority and plurality rules. We apply our proposal to examine the effect of education on earnings. The proposed method is implemented in the R package RobustIV available from CRAN. 

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5. Causal inference with hidden mediators

   https://doi.org/10.1093/biomet/asae037  

   Ghassami, Amiremad; Yang, Alan; Shpitser, Ilya; Tchetgen_Tchetgen, Eric (January 2025, Biometrika)

   Summary Proximal causal inference was recently proposed as a framework to identify causal effects from observational data in the presence of hidden confounders for which proxies are available. In this paper, we extend the proximal causal inference approach to settings where identification of causal effects hinges upon a set of mediators that are not observed, yet error prone proxies of the hidden mediators are measured. Specifically, (i) we establish causal hidden mediation analysis, which extends classical causal mediation analysis methods for identifying natural direct and indirect effects under no unmeasured confounding to a setting where the mediator of interest is hidden, but proxies of it are available; (ii) we establish a hidden front-door criterion, criterion to allow for hidden mediators for which proxies are available; (iii) we show that the identification of a certain causal effect called the population intervention indirect effect remains possible with hidden mediators in settings where challenges in (i) and (ii) might co-exist. We view (i)–(iii) as important steps towards the practical application of front-door criteria and mediation analysis as mediators are almost always measured with error and, thus, the most one can hope for in practice is that the measurements are at best proxies of mediating mechanisms. We propose identification approaches for the parameters of interest in our considered models. For the estimation aspect, we propose an influence function-based estimation method and provide an analysis for the robustness of the estimators. 

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