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1. Mapping barrier island soil moisture using a radiative transfer model of hyperspectral imagery from an unmanned aerial system

   https://doi.org/10.1038/s41598-021-82783-3  

   Eon, Rehman_S; Bachmann, Charles_M (February 2021, Scientific Reports)

   Abstract The advent of remote sensing from unmanned aerial systems (UAS) has opened the door to more affordable and effective methods of imaging and mapping of surface geophysical properties with many important applications in areas such as coastal zone management, ecology, agriculture, and defense. We describe a study to validate and improve soil moisture content retrieval and mapping from hyperspectral imagery collected by a UAS system. Our approach uses a recently developed model known as the multilayer radiative transfer model of soil reflectance (MARMIT). MARMIT partitions contributions due to water and the sediment surface into equivalent but separate layers and describes these layers using an equivalent slab model formalism. The model water layer thickness along with the fraction of wet surface become parameters that must be optimized in a calibration step, with extinction due to water absorption being applied in the model based on equivalent water layer thickness, while transmission and reflection coefficients follow the Fresnel formalism. In this work, we evaluate the model in both field settings, using UAS hyperspectral imagery, and laboratory settings, using hyperspectral spectra obtained with a goniometer. Sediment samples obtained from four different field sites representing disparate environmental settings comprised the laboratory analysis while field validation used hyperspectral UAS imagery and coordinated ground truth obtained on a barrier island shore during field campaigns in 2018 and 2019. Analysis of the most significant wavelengths for retrieval indicate a number of different wavelengths in the short-wave infra-red (SWIR) that provide accurate fits to measured soil moisture content in the laboratory with normalized root mean square error (NRMSE)< 0.145, while independent evaluation from sequestered test data from the hyperspectral UAS imagery obtained during the field campaign obtained an average NRMSE = 0.169 and median NRMSE = 0.152 in a bootstrap analysis. 

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2. Evaluating Predictive Models of Tree Foliar Moisture Content for Application to Multispectral UAS Data: A Laboratory Study

   https://doi.org/10.3390/rs15245703  

   Lad, Lauren E.; Tinkham, Wade T.; Sparks, Aaron M.; Smith, Alistair M. (December 2023, Remote Sensing)

   Water supply is a critical component of tree physiological health, influencing a tree’s photosynthetic activity and resilience to disturbances. The climatic regions of the western United States are particularly at risk from increasing drought, fire, and pest interactions. Existing methods for quantifying drought stress and a tree’s relative resilience against disturbances mostly use moderate-scale (20–30 m) multispectral satellite sensor data. However, tree water status (i.e., water stress) quantification using sensors like Landsat and Sentinel are error-prone given that the spectral reflectance of pixels are a mixture of the dominant tree canopy, surface vegetation, and soil. Uncrewed aerial systems (UAS) equipped with multispectral sensors could potentially provide individual tree water status. In this study, we assess whether the simulated band equivalent reflectance (BER) of a common UAS optical multispectral sensor can accurately quantify the foliar moisture content and water stress status of individual trees. To achieve this, water was withheld from groups of Douglas-fir and western white pine saplings. Then, measurements of each sapling’s foliar moisture content (FMC) and spectral reflectance were converted to BER of a consumer-grade multispectral camera commonly used on UAS. These bands were used in two classification models and three regression models to develop a best-performing FMC model for predicting either the water status (i.e., drought-stressed or healthy) or the foliar moisture content of each sapling, respectively. Our top-performing models were a logistic regression classification and a multiple linear regression which achieved a classification accuracy of 96.55% and an r2 of 82.62, respectively. These FMC models could provide an important tool for investigating tree crown level water stress, as well as drought interactions with other disturbances, and provide land managers with a vital indicator of tree resilience. 

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3. Remote Soil Moisture Measurement from Drone-Borne Reflectance Spectroscopy: Applications to Hydroperiod Measurement in Desert Playas

   https://doi.org/10.3390/rs13051035  

   Levy, Joseph S.; Johnson, Jessica T. (March 2021, Remote Sensing)

   null (Ed.)

   The extent, timing, and magnitude of soil moisture in wetlands (the hydropattern) is a primary physical control on biogeochemical processes in desert environments. However, determining playa hydropatterns is challenged by the remoteness of desert basin sites and by the difficulty in determining soil moisture from remotely sensed data at fine spatial and temporal scales (hundreds of meters to kilometers, and hours to days). Therefore, we developed a new, reflectance-based soil moisture index (continuum-removed water index, or CRWI) that can be determined via hyperspectral imaging from drone-borne platforms. We compared its efficacy at remotely determining soil moisture content to existing hyperspectral and multispectral soil moisture indices. CRWI varies linearly with in situ soil moisture content (R2 = 0.89, p < 0.001) and is comparatively insensitive to soil clay content (R2 = 0.4, p = 0.01), soil salinity (R2 = 0.82, p < 0.001), and soil grain size distribution (R2 = 0.67, p < 0.001). CRWI is negatively correlated with clay content, indicating it is not sensitive to hydrated mineral absorption features. CRWI has stronger correlation with surface soil moisture than other hyperspectral and multispectral indices (R2 = 0.69, p < 0.001 for WISOIL at this site). Drone-borne reflectance measurements allow monitoring of soil moisture conditions at the Alvord Desert playa test site over hectare-scale soil plots at measurement cadences of minutes to hours. CRWI measurements can be used to determine surface soil moisture at a range of desert sites to inform management decisions and to better reveal ecosystem processes in water-limited environments. 

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4. Retrieval of Sediment Filling Factor in a Salt Panne from Multi-View Hyperspectral Imagery

   https://doi.org/10.3390/rs12030422  

   Eon, Rehman S.; Bachmann, Charles M.; Lapszynski, Christopher S.; Tyler, Anna Christina; Goldsmith, Sarah (February 2020, Remote Sensing)

   This work describes a study using multi-view hyperspectral imagery to retrieve sediment filling factor through inversion of a modified version of the Hapke radiative transfer model. We collected multi-view hyperspectral imagery from a hyperspectral imaging system mounted atop a telescopic mast from multiple locations and viewing angles of a salt panne on a barrier island at the Virginia Coast Reserve Long-Term Ecological Research site. We also collected ground truth data, including sediment bulk density and moisture content, within the common field of view of the collected hyperspectral imagery. For samples below a density threshold for coherent effects, originally predicted by Hapke, the retrieved sediment filling factor correlates well with directly measured sediment bulk density ( R 2 = 0.85 ). The majority of collected samples satisfied this condition. The onset of the threshold occurs at significantly higher filling factors than Hapke’s predictions for dry sediments because the salt panne sediment has significant moisture content. We applied our validated inversion model to successfully map sediment filling factor across the common region of overlap of the multi-view hyperspectral imagery of the salt panne. 

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5. Mapping liquid water content in snow at the millimeter scale: an intercomparison of mixed-phase optical property models using hyperspectral imaging and in situ measurements

   https://doi.org/10.5194/tc-16-43-2022  

   Donahue, Christopher; Skiles, S. McKenzie; Hammonds, Kevin (January 2022, The Cryosphere)

   Abstract. It is well understood that the distribution and quantity of liquid water in snow is relevant for snow hydrology and avalanche forecasting, yet detecting and quantifying liquid water in snow remains a challenge from themicro- to the macro-scale. Using near-infrared (NIR) spectral reflectancemeasurements, previous case studies have demonstrated the capability toretrieve surface liquid water content (LWC) of wet snow by leveraging shifts in the complex refractive index between ice and water. However, different models to represent mixed-phase optical properties have been proposed, including (1) internally mixed ice and water spheres, (2) internally mixed water-coated ice spheres, and (3) externally mixed interstitial ice and water spheres. Here, from within a controlled laboratory environment, we determined the optimal mixed-phase optical property model for simulating wet snow reflectance using a combination of NIR hyperspectral imaging, radiative transfer simulations (Discrete Ordinate Radiative Transfer model, DISORT), and an independent dielectric LWC measurement (SLF Snow Sensor). Maps of LWC were produced by finding the lowest residual between measured reflectance and simulated reflectance in spectral libraries, generated for each model with varying LWC and grain size, and assessed against the in situ LWC sensor. Our results show that the externally mixed model performed the best, retrieving LWC with an uncertainty of ∼1 %, while the simultaneously retrieved grain size better represented wet snow relative to the established scaled band area method. Furthermore, the LWC retrieval method was demonstrated in the field by imaging a snowpit sidewall during melt conditions and mapping LWC distribution in unprecedented detail, allowing for visualization of pooling water and flow features. 

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