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  • Stable isotope values of consumers, producers, and organic matter in the Shark River Slough and Taylor Slough, Everglades National Park (FCE LTER), Florida, USA, 2019 – ongoing
Title: Stable isotope values of consumers, producers, and organic matter in the Shark River Slough and Taylor Slough, Everglades National Park (FCE LTER), Florida, USA, 2019 – ongoing
{"Abstract":["Wetland food webs have often been characterized as detrital-based ‘brown’ energy pyramids, whereas the relative role of autotrophic (‘green’) vs. microbial (‘brown’) energy sources falls along a continuum set by physical drivers, as well as autochthonous and allochthonous inputs (Moore et al. 2004; Evans-White & Halvorson 2017) that change with ecosystem development (Schmitz et al. 2006). In the Florida Coastal Everglades (FCE), metabolic imbalances, including the collapse of calcareous periphyton mats, begin with a loss of foundation species primary production and legacy organic matter (Gaiser et al. 2006). This process likely enhances heterotrophic microbial productivity (Schulte 2016) and the supply of detrital energy to consumers by changing bioavailable and recalcitrant carbon supplies (Baggett et al. 2013). A shift from complex periphyton communities to transient planktonic communities under elevated P exposure reduces habitat structure and animal refuges but increases ‘green’ energy supplies and edibility (Trexler et al. 2015; Naja et al. 2017). Multiple sites (n=9) within the FCE were selected to document changes in coastal food webs as a result of eutrophication and increasing hydrologic variability. The project began in 2019 and is currently ongoing.\n \n References:\n Baggett, L. P., Heck, K. L., Frankovich, T. A., Armitage, A. R., & Fourqurean, J. W. (2013). Stoichiometry, growth, and fecundity responses to nutrient enrichment by invertebrate grazers in sub-tropical turtle grass (Thalassia testudinum) meadows. Marine biology, 160, 169-180.\n Evans-White, M. A., and H. M. Halvorson. 2017. Comparing the Ecological Stoichiometry in Green and Brown Food Webs – A Review and Meta-analysis of Freshwater Food Webs. Frontiers in Microbiology 8:1184. \n Gaiser, E. E., Childers, D. L., Jones, R. D., Richards, J. H., Scinto, L. J., & Trexler, J. C. (2006). Periphyton responses to eutrophication in the Florida Everglades: cross‐system patterns of structural and compositional change. Limnology and Oceanography, 51(1part2), 617-630.\n Moore, J. C., E. L. Berlow, D. C. Coleman, P. C. Ruiter, Q. Dong, A. Hastings, N. C. Johnson, K. S. McCann, K. Melville, P. J. Morin, K. Nadelhoffer, A. D. Rosemond, D. M. Post, J. L. Sabo, K. M. Scow, M. J. Vanni, and D. H. Wall. 2004. Detritus, trophic dynamics and biodiversity: Detritus, trophic dynamics and biodiversity. Ecology Letters 7:584–600. \n Naja, M., Childers, D. L., & Gaiser, E. E. (2017). Water quality implications of hydrologic restoration alternatives in the Florida Everglades, United States. Restoration Ecology, 25, S48-S58.\n Schmitz, O. J., Kalies, E. L., & Booth, M. G. (2006). Alternative dynamic regimes and trophic control of plant succession. Ecosystems, 9, 659-672.\n Schulte, Nicholas O., "Controls on Benthic Microbial Community Structure and Assembly in a Karstic Coastal Wetland" (2016). FIU Electronic Theses and Dissertations. 2447. 10.25148/etd.FIDC000233\n Trexler, J. C., Gaiser, E. E., Kominoski, J. S., & Sanchez, J. (2015). The role of periphyton mats in consumer community structure and function in calcareous wetlands: lessons from the Everglades. Microbiology of the everglades ecosystem, 155-179."]}  more » « less
Award ID(s):
2025954 1832229
PAR ID:
10643722
Author(s) / Creator(s):
Publisher / Repository:
Environmental Data Initiative
Date Published:
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
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    {"Abstract":["Stomach contents of fishes (1977-1981) and stable isotopes of fishes, invertebrates, and basal resources (1994) were collected from spikerush marsh, sawgrass ridge, and alligator pond habitats in Shark River Slough, Everglades National Park, Florida, USA. These data were used to quantify diet, trophic niche area, trophic position, basal resource use and how these metrics vary among size classes, seasons, and habitats. Data collection is complete. These data support Flood et al. (2023). Associated R code will be made available through Peter Flood's GitHub: https://github.com/pjflood/historic_everglades_aquatic_food_web. \n References:\n Flood, Peter J., William F. Loftus, and Joel C. Trexler. "Fishes in a seasonally pulsed wetland show spatiotemporal shifts in diet and trophic niche but not shifts in trophic position." Food Webs 34 (2023): e00265. https://doi.org/10.1016/j.fooweb.2022.e00265"]} 
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  2. ; (, Texas Data Repository)
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  5. ; ; (, Zenodo)
    {"Abstract":["Last modified: January 09, 2025\n\nIntroductionThis dataset comprises all bee interactions indexed by Global Biotic Interactions (GloBI; Poelen et al. 2014). It is published quarterly by the Big Bee Project (Seltmann et al. 2021) to summarize all available knowledge about bee interactions from natural history collections, community science observations (i.e., iNaturalist), and the literature. Interactions include flower visitation, parasitic interactions (mite, viral), lecty, and many others.\n\nData DescriptionPlease see the integration process page to better understand how Global Biotic Interactions combines datasets from various sources. The complete interaction dataset for all species can be accessed via https://www.globalbioticinteractions.org/data.\n\nData is filtered for unique records based on the interaction description and source citation. Archives contain full data records and unique filtered records in tab-delimited format.\n\nDataset column name definitions https://api.globalbioticinteractions.org/interactionFields or https://api.globalbioticinteractions.org/interactionFields\n\nDuplicate records occur in the database because more than one provider shares information. This is most frequently occuring in museum specimen data and duplicates can be identified evaluating the institutionCode, collectionCode and catalogNumber fields. The file catalogNumber_counts.tsv groups records by these three fields for this dataset, but does not filter out duplicate records. Additionally, this dataset includes the citation information provided by the data publisher. The provided sourceCitation may not include information about the primary provider (often the natural history collection) the specimen data originates and the catalogNumber should be referenced to understand the original source of the data.\n\nIf you know of a missing dataset, or wish to share your dataset, please contact us!\n\n \n\nMetrics\n\n\n\n\nDate\n\n\nTotal bee records\n\n\n\n07-17-2020\n232,906\n\n\n01-24-2021\n257,738\n\n\n11-17-2021\n226,160\n\n\n06-01-2022\n286,818\n\n\n11-07-2022\n429,308\n\n\n01-18-2024\n842,819\n\n\n07-03-2024\n1,109,057\n\n\n01-09-2025\n1,223,768\n\n\n11-25-2025\n2,480,473\n\n\n\n\n \n\n\n\n\nDate\nAndrenidae\nApidae\nColletidae\nHalictidae\n\n\n07-17-2020\n73,463\n106,222\n20,821\n58,880\n\n\n01-24-2021\n77,824\n120,919\n21,376\n63,945\n\n\n11-17-2021\n25,535\n134,517\n10,568\n43,070\n\n\n06-01-2022\n78,016\n144,827\n20,409\n64,054\n\n\n11-07-2022\n84,172\n171,378\n30,792\n79,155\n\n\n01-18-2024\n166,473\n334,224\n63,847\n171,931\n\n\n07-03-2024\n\n\n289,400\n\n\n\n371,953\n\n\n\n83,337\n\n\n\n190,562\n\n\n\n01-09-2025\n\n\n204,565\n\n\n\n686,195\n\n\n\n70,724\n\n\n\n241,856\n\n\n\n11-25-2025\n\n\n269,191\n\n\n\n1,509,768\n\n\n\n129,763\n\n\n\n386,203\n\n\n\n\n\n \n\n\n\n\nDate\nMegachilidae\nMelittidae\nStenotritidae\n\n\n07-17-2020\n44,449\n2,511\n23\n\n\n01-24-2021\n48,856\n2,624\n18\n\n\n11-17-2021\n37,001\n995\n9\n\n\n06-01-2022\n54,516\n2,994\n18\n\n\n11-07-2022\n61,391\n2,396\n24\n\n\n01-18-2024\n100,814\n5,088\n442\n\n\n07-03-2024\n\n\n162,587\n\n\n\n4,964\n\n438\n\n\n01-09-2025\n\n\n126,113\n\n\n\n5,928\n\n441\n\n\n11-25-2025\n\n\n174,935\n\n\n\n9,764\n\n849\n\n\n\n\n \n\nIncluded files\n\n\n\nfilter_and_count_bee_families.sh - script for separating bee records into family and counting number of records for each family\n\ncitation-count.sh - script for counting citations\n\nfamily_counts.tsv - counts by family\n\nglobi-bees-filtered_file.tsv.gz - list of all bee interaction data indexed on Global Biotic Interactions from GloBI version 2025-Nov-25 produced by [filter_and_count_bee_families.sh].\n\ninteractions.tsv.gz - archive of the full Global Biotic Interaction dataset on November 25, 2025. Downloaded from https://www.globalbioticinteractions.org\n\n\n \n\nInteraction Sources\n\nBelow is a list of sources that contributed to this dataset, along with raw counts of unique interactions and links to the corresponding digital archives and reviews. These datasets are indexed and reviewed by Global Biotic Interactions (GloBI) using automated, reproducible workflows that extract species-interaction records, reconcile taxonomic names against authoritative catalogs, and summarize the findings. Each review produces a versioned digital archive to ensure long-term preservation and to document data provenance. For details, see the Methods section within each linked archive.\n\n\n\n\ncount\nsource\n\n\n276746\n\n\n\n\nhttp://iNaturalist.org is a place where you can record what you see in nature, meet other nature lovers, and learn about the natural world.\n\n\n\n\n266822\n\n\n\n\nReji Chacko, M., Albouy, C., Altermatt, F., Brändle, M., Casanelles Abella, J., Boussange, V., Campell, F., Ellis, W. N., Fopp, F., Gossner, M. M., Ho., H., Joss, A., Kipf, P., Neff, F., Petrović, A., Prié, V., Tomanović, Ž., Zimmerli, N., Pellissier, L. (2024). trophiCH v1 - a food web for Switzerland. EnviDat. https://www.doi.org/10.16904/envidat.467.\n\n\n\n\n258683\n\n\n\n\nUSGS Biodiversity Information Serving Our Nation (BISON) IPT\n\n\n\n\n180849\n\n\n\n\necdysis - a portal for live-managing arthropod occurrence data\n\n\n\n\n113301\n\n\n\n\nDigital Bee Collections Network, 2014 (and updates). Version: 2015-03-18. National Science Foundation grant DBI 0956388; PBI: Phytophagous Insects as a Model Group for Documenting Planetary Biodiversity (Insecta: Heteroptera: Miridae: Orthotylinae, Phylinae). Version: 08 Mar 2016. National Science Foundation grant DBI#0316495; Tri-Trophic Thematic Collection Network, 2014 (and updates). Version: 08 Mar 2016. http://tcn.amnh.org/. National Science Foundation grant(s) EF#1115081, EF#1115103, EF#1115080, EF#1115144, EF#1115191, EF#1115104, EF#1115115\n\n\n\n\n112006\n\n\n\n\nUniversity of Kansas Natural History Museum - Snow Entomological Museum Collection\n\n\n\n\n79134\n\n\n\n\nSymbiota Collections of Arthropods Network (SCAN)\n\n\n\n\n62736\n\n\n\n\nFrost Entomological Museum, Pennsylvania State University\n\n\n\n\n49513\n\n\n\n\nLanuza et al. (2025), EuPPollNet: A European Database of Plant-Pollinator Networks. Global Ecol Biogeogr, 34: e70000. https://doi.org/10.1111/geb.70000\n\n\n\n\n41298\n\n\n\n\nBalfour, N.J., Castellanos, M.C., Goulson, D., Philippides, A. and Johnson, C., 2022. DoPI: The Database of Pollinator Interactions. Ecology, 103, e3801.\n\n\n\n\n28517\n\n\n\n\nPaDIL Bee records from the Pests and Diseases Image Library, http://www.padil.gov.au.\n\n\n\n\n27114\n\n\n\n\nGuzman, Laura Melissa; Kelly, Tyler; Elle, Elizabeth, 2022, "A dataset for pollinator diversity and their interactions with plants in the Pacific NorthWest", https://doi.org/10.5683/SP3/WTEZNH, Borealis, V1\n\n\n\n\n24564\n\n\n\n\nUniversity of Michigan Museum of Zoology Insect Division. Full Database Export 2020-11-20 provided by Erika Tucker and Barry Oconner.\n\n\n\n\n23727\n\n\n\n\nCarril OM, Griswold T, Haefner J, Wilson JS. (2018) Wild bees of Grand Staircase-Escalante National Monument: richness, abundance, and spatio-temporal beta-diversity. PeerJ 6:e5867 https://doi.org/10.7717/peerj.5867\n\n\n\n\n18757\n\n\n\n\nA. Thessen. 2014. Species associations extracted from EOL text data objects via text mining.\n\n\n\n\n18003\n\n\n\n\nPensoft Darwin Core Archives available via Integrated Publication Toolkit\n\n\n\n\n17603\n\n\n\n\nDorey, J.B., Fischer, E.E., Chesshire, P.R. et al. A globally synthesised and flagged bee occurrence dataset and cleaning workflow. Sci Data 10, 747 (2023). https://doi.org/10.1038/s41597-023-02626-w\n\n\n\n\n17088\n\n\n\n\nVandame R, Mérida J, Sagot P, Madrigal González D, Bedolla García B Y, González-Vanegas P A, Cultid-Medina C A, Barrios J M (2023). Potential host plant records recovered from ECOAB wild bee collection, Mexico. Version 1.10. Comisión nacional para el conocimiento y uso de la biodiversidad.\n\n\n\n\n15763\n\n\n\n\nSchwarz, Benjamin et al. (2021). Data from: Temporal scale-dependence of plant-pollinator networks [Dataset]. Dryad. https://doi.org/10.5061/dryad.qz612jmbp\n\n\n\n\n10211\n\n\n\n\nPensoft Darwin Core Archives with associateTaxa columns\n\n\n\n\n9104\n\n\n\n\nAmerican Museum of Natural History Hymenoptera\n\n\n\n\n8678\n\n\n\n\nAubouin, L., Genoud, D., Givord-Coupeau, B. et al. BeeFunc, a comprehensive trait database for French bees. Sci Data 12, 1302 (2025). https://doi.org/10.1038/s41597-025-05626-0\n\n\n\n\n8657\n\n\n\n\nWeb of Life. http://www.web-of-life.es .\n\n\n\n\n6600\n\n\n\n\nUniversity of Michigan Museum of Zoology, Division of Insects\n\n\n\n\n6331\n\n\n\n\nAllen-Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., et al. 2022. "CropPol: A Dynamic, Open and Global Database on Crop Pollination." Ecology 103(3): e3614. https://doi.org/10.1002/ecy.3614\n\n\n\n\n6290\n\n\n\n\nPurdue Entomological Research Collection\n\n\n\n\n6178\n\n\n\n\nRedhead, J.W.; Coombes, C.F.; Dean, H.J.; Dyer, R.; Oliver, T.H.; Pocock, M.J.O.; Rorke, S.L.; Vanbergen, A.J.; Woodcock, B.A.; Pywell, R.F. (2018). Plant-pollinator interactions database for construction of potential networks. NERC Environmental Information Data Centre. https://doi.org/10.5285/6d8d5cb5-bd54-4da7-903a-15bd4bbd531b\n\n\n\n\n5535\n\n\n\n\n@article{Hale_2024, title={A highly resolved network reveals the role of terrestrial herbivory in structuring aboveground food webs}, volume={379}, ISSN={1471-2970}, url={http://dx.doi.org/10.1098/rstb.2023.0180}, DOI={10.1098/rstb.2023.0180}, number={1909}, journal={Philosophical Transactions of the Royal Society B: Biological Sciences}, publisher={The Royal Society}, author={Hale, Kayla R. S. and Curlis, John David and Auteri, Giorgia G. and Bishop, Sasha and French, Rowan L. K. and Jones, Lance E. and Mills, Kirby L. and Scholtens, Brian G. and Simons, Meagan and Thompson, Cody and Tourville, Jordon and Valdovinos, Fernanda S.}, year={2024}, month=jul }\n\n\n\n\n5531\n\n\n\n\nhttps://mangal.io - the ecological interaction database.\n\n\n\n\n5316\n\n\n\n\nClint Otto, Russ Bryant, and Ned H. Euliss Jr., 2020, The U.S. Geological Survey Pollinator Library Dataset: U.S. Geological Survey. https://doi.org/10.5066/P9DSS3VL\n\n\n\n\n4688\n\n\n\n\nUniversity of Colorado Museum of Natural History Entomology Collection\n\n\n\n\n4680\n\n\n\n\nNational Database Plant Pollinators. Center for Plant Conservation at San Diego Zoo Global. Accessed via https://saveplants.org/national-collection/pollinator-search/ on 2020-06-05.\n\n\n\n\n4284\n\n\n\n\nSeltmann, K., Van Wagner, J., Behm, R., Brown, Z., Tan, E., & Liu, K. (2020). BID: A project to share biotic interaction and ecological trait data about bees (Hymenoptera: Anthophila). 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(Version final) Version Date 2005-10-01 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/3087\n\n\n\n\n54\n\n\n\n\nFarr, David F.; Rossman, Amy Y.; Castlebury, Lisa A. (2021). United States National Fungus Collections Fungus-Host Dataset. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1524414.\n\n\n\n\n53\n\n\n\n\nSoleto-Casas RC and Simões N (2020). Parasitic and commensal invertebrates of echinoderms from American Tropical And Subtropical Atlantic manually extracted from literature.\n\n\n\n\n48\n\n\n\n\nSemantic Prototypes in Research Ecoinformatics (SPIRE). Data provided by Joel Sachs. See also http://ebiquity.umbc.edu/get/a/publication/297.pdf .\n\n\n\n\n45\n\n\n\n\nOlito, Colin; Fox, Jeremy W. (2015), Data from: Species traits and abundances predict metrics of plant–pollinator network structure, but not pairwise interactions, Dryad, Dataset, https://doi.org/10.5061/dryad.7st32\n\n\n\n\n43\n\n\n\n\nPrice Institute of Parasite Research, School of Biological Sciences, University of Utah\n\n\n\n\n40\n\n\n\n\nSarah E Miller. 9/19/2017. Species associations manually extracted from Benesh, D. P., Lafferty, K. D. and Kuris, A. (2017), A life cycle database for parasitic acanthocephalans, cestodes, and nematodes. Ecology, 98: 882. doi:10.1002/ecy.1680\n\n\n\n\n37\n\n\n\n\nPocock, Michael J. O.; Evans, Darren M.; Memmott, Jane (2012), Data from: The robustness and restoration of a network of ecological networks, Dryad, Dataset, https://doi.org/10.5061/dryad.3s36r118\n\n\n\n\n36\n\n\n\n\nQuentin J. Groom. 2020. Species interactions of species on the List of invasive alien species of Union concern\n\n\n\n\n34\n\n\n\n\nSarah E Miller. 6/20/2015. Species associations manually extracted from datasets https://www.nceas.ucsb.edu/interactionweb/resources.html.\n\n\n\n\n32\n\n\n\n\nBallantyne, Gavin; Baldock, Katherine C. R.; Willmer, Pat G. (2015), Data from: Constructing more informative plant-pollinator networks: visitation and pollen deposition networks in a heathland plant community, Dryad, Dataset, https://doi.org/10.5061/dryad.17pp3\n\n\n\n\n31\n\n\n\n\nShaw, LP, Wang, AD, Dylus, D, et al. The phylogenetic range of bacterial and viral pathogens of vertebrates. Mol Ecol. 2020; 29: 3361– 3379. https://doi.org/10.1111/mec.15463\n\n\n\n\n27\n\n\n\n\nMuseum for Southwestern Biology (MSB) Parasite Collection\n\n\n\n\n27\n\n\n\n\nSarah E Miller. 5/17/2016. Wenzel, Rupert L., and Vernon J. Tipton. Appendix: Classified List of Hosts and Parasites. Chicago, Ill.: Field Museum of Natural History, 1966.\n\n\n\n\n26\n\n\n\n\nSarah E Miller. 9/19/2016. Species associations extracted from Graystock, P., Blane, E.J., McFrederick, Q.S., Goulson, D. and Hughes, W.O., 2016. Do managed bees drive parasite spread and emergence in wild bees?. International Journal for Parasitology: Parasites and Wildlife, 5(1), pp.64-75.\n\n\n\n\n23\n\n\n\n\nAgosti, Donat. 2020. Transcription of Linné, C. von, 1758. Systema naturae per regna tria naturae secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. Available at: http://dx.doi.org/10.5962/bhl.title.542 .\n\n\n\n\n23\n\n\n\n\nUdy, Kristy; Reininghaus, Hannah; Scherber, Christoph; Tscharntke, Teja (2020), Data from: Plant-pollinator interactions along an urbanization gradient from cities and villages to farmland landscapes, Dryad, Dataset, https://doi.org/10.5061/dryad.4mw6m906s\n\n\n\n\n20\n\n\n\n\nIPBES. (2016). The assessment report of the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services on pollinators, pollination and food production. Table 2.4.3 p88 Zenodo. https://doi.org/10.5281/zenodo.3402857\n\n\n\n\n20\n\n\n\n\nSherman, Aja C.; Geiselman, Cullen; Simons, Nancy B.; Upham, Nathan S.; Poelen, Jorrit H.; Reeder, DeeAnn M.; Bertolino, Sandro; Groom, Quentin; Phelps, Kendra; Agosti, Donat; Willoughby, Anna R. In Preparation. Bat-Co-Roosting Database develop by the Biodiversity-related knowledge hub on COVID-19.\n\n\n\n\n19\n\n\n\n\nSeltzer, Carrie; Wysocki, William; Palacios, Melissa; Eickhoff, Anna; Pilla, Hannah; Aungst, Jordan; Mercer, Aaron; Quicho, Jamie; Voss, Neil; Xu, Man; J. Ndangalasi, Henry; C. Lovett, Jon; J. Cordeiro, Norbert (2015): Plant-animal interactions from Africa. figshare. https://dx.doi.org/10.6084/m9.figshare.1526128\n\n\n\n\n18\n\n\n\n\nJakovos Demetriou and Quentin Groom 2014. Species associations of Sceliphron manually extracted from literature.\n\n\n\n\n17\n\n\n\n\nSpecies Connect. https://speciesconnect.com\n\n\n\n\n16\n\n\n\n\nGeiselman, Cullen K. & Sarah Younger. 2020. Bat Eco-Interactions Database. www.batbase.org\n\n\n\n\n14\n\n\n\n\nFabricia Sousa Paz, Carlos Eduardo Pinto, Rafael Melo de Brito, Vera Lucia Imperatriz-Fonseca, Tereza Cristina Giannini, Edible Fruit Plant Species in the Amazon Forest Rely Mostly on Bees and Beetles as Pollinators, Journal of Economic Entomology, Volume 114, Issue 2, April 2021, Pages 710–722, https://doi.org/10.1093/jee/toaa284\n\n\n\n\n14\n\n\n\n\nScientific Committee on Antarctic Research. (2023). SCAR Southern Ocean Diet and Energetics Database (2023-04-04) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.7796465 hash://md5/e41e29d8fb3c2d731f292ec08798cf6b hash://md5/05abf23c0b9e5f4bc721ff407455af0a hash://sha256/7a344b858ab8d1daeca1da49843e8bf957f1116ff9e10a29176ab5c02cb49bef\n\n\n\n\n12\n\n\n\n\nBernice Pauahi Bishop Museum, J. Linsley Gressitt Center for Research in Entomology\n\n\n\n\n12\n\n\n\n\nGaden S. Robinson; Phillip R. Ackery; Ian Kitching; George W Beccaloni; Luis M. Hernández (2023). HOSTS (from HOSTS - a Database of the World's Lepidopteran Hostplants) [Data set resource]. Natural History Museum. https://data.nhm.ac.uk/dataset/hosts/resource/877f387a-36a3-486c-a0c1-b8d5fb69f85a via Natural History Museum (2023). Data Portal query on 1 resources created at 2023-05-24 11:19:42.032183 PID https://doi.org/10.5519/qd.bsucrxdz\n\n\n\n\n12\n\n\n\n\nGandhi, K. J. K., & Herms, D. A. (2009). North American arthropods at risk due to widespread Fraxinus mortality caused by the Alien Emerald ash borer. Biological Invasions, 12(6), 1839–1846. doi:10.1007/s10530-009-9594-1.\n\n\n\n\n12\n\n\n\n\nMeyer R.S., et al., Beach environmental DNA fills gaps in photographic biomonitoring to track spatiotemporal community turnover across 82 phyla. Environmental DNA, submitted June 3, 2019.\n\n\n\n\n10\n\n\n\n\nConsortium of Small Vertebrate Collections\n\n\n\n\n10\n\n\n\n\nLee, Leshon; Tan, David J. X.; Oboňa, Jozef; Gustafsson, Daniel R.; Ang, Yuchen; Meier, Rudolf (2021). Phoresy Records Appendix.xlsx. figshare. Dataset. https://doi.org/10.6084/m9.figshare.12671711.v1\n\n\n\n\n9\n\n\n\n\nC. Anela Choy, Steven H. D. Haddock, Bruce H. Robison. 2017. Deep pelagic food web structure as revealed by in situ feeding observations. Proc. R. Soc. B 2017 284 20172116; DOI:10.1098/rspb.2017.2116.\n\n\n\n\n8\n\n\n\n\nSarah E Miller. 7/6/2016. Arctos collection.\n\n\n\n\n6\n\n\n\n\nGeiselman, Cullen K. and Tuli I. Defex. 2015. Bat Eco-Interactions Database. www.batplant.org\n\n\n\n\n5\n\n\n\n\nNEON Biorepository Portal at Arizona State University (ASU)\n\n\n\n\n4\n\n\n\n\nSarah E Miller. 4/20/2015. Species associations manually extracted from various papers and articles from site https://repository.si.edu\n\n\n\n\n4\n\n\n\n\nSarah E Miller. 5/28/2015. Arnaud, Paul Henri. A Host-parasite Catalog of North American Tachinidae (Diptera). Washington, D.C.: U.S. Dept. of Agriculture, Science and Education Administration, 1978.\n\n\n\n\n4\n\n\n\n\nSarah E Miller. 7/7/2016. Text gathered from Wirta, H.K., Vesterinen, E.J., Hambäck, P.A., Weingartner, E., Rasmussen, C., Reneerkens, J., Schmidt, N.M., Gilg, O. and Roslin, T., 2015. Exposing the structure of an Arctic food web. Ecology and evolution, 5(17), pp.3842-3856.\n\n\n\n\n4\n\n\n\n\nUniversity of California Santa Barbara Herbarium\n\n\n\n\n3\n\n\n\n\nGippet, J.M.W., Bates, O.K., Moulin, J. et al. The global risk of infectious disease emergence from giant land snail invasion and pet trade. Parasites Vectors 16, 363 (2023). https://doi.org/10.1186/s13071-023-06000-y\n\n\n\n\n3\n\n\n\n\nJorrit H. Poelen. 2017. Species interactions associated with known species interaction datasets.\n\n\n\n\n3\n\n\n\n\nMinisterio del Ambiente, Agua y Transición Ecológica de Ecuador - MAATE.\n\n\n\n\n3\n\n\n\n\nSarah E Miller. 9/15/2016. Species associations extracted from http://parasiticplants.siu.edu/index.html.\n\n\n\n\n3\n\n\n\n\nSarah E Miller. 9/3/2015. Species associations manually extracted from JSTOR.\n\n\n\n\n3\n\n\n\n\nSchriml, L. M., Arze, C., Nadendla, S., Ganapathy, A., Felix, V., Mahurkar, A., … Hall, N. (2009). GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database. Nucleic Acids Research, 38(Database), D754–D764. doi:10.1093/nar/gkp832\n\n\n\n\n2\n\n\n\n\nCarnegie Invertebrate Zoology Collection\n\n\n\n\n2\n\n\n\n\nF. Gabriel. Muñoz. 2017. Palm-Animal frugivore associations extracted from literature with Biodiversity Observations Miner for SouthEast Asia.\n\n\n\n\n2\n\n\n\n\nFerrer-Paris, José R.; Sánchez-Mercado, Ada Y.; Lozano, Cecilia; Zambrano, Liset; Soto, José; Baettig, Jessica; Leal, María (2014): A compilation of larval host-plant records for six families of butterflies (Lepidoptera: Papilionoidea) from available electronic resources. figshare. http://dx.doi.org/10.6084/m9.figshare.1168861\n\n\n\n\n2\n\n\n\n\nInouye, David (2017). An Access database of records collated from the literature about flies pollinating or at least visiting flowers, updated 2017. https://doi.org/10.13016/M2SZ73 http://hdl.handle.net/1903/19193 hash://sha256/a9ab0a6173d34695c85f5fb8947e196478d1253d9d79b0662921ef4e36639c05\n\n\n\n\n2\n\n\n\n\nPaleo Digitization Working Group. Biological associations extracted from fossil specimens.\n\n\n\n\n2\n\n\n\n\nQuentin J. Groom. 2020. Bat interation data manually extracted from literature.\n\n\n\n\n2\n\n\n\n\nSarah E. Miller. 04/14/2015. Extracted from literature Scott, J.A. 1986.  The Butterflies of North America.  Stanford University Press, Stanford, CA\n\n\n\n\n2\n\n\n\n\nStrona, G., Palomares, M. L. D., Bailly, N., Galli, P., & Lafferty, K. D. (2013). Host range, host ecology, and distribution of more than 11 800 fish parasite species. Ecology, 94(2), 544–544. doi:10.1890/12-1419.1\n\n\n\n\n2\n\n\n\n\nStrong, Justin S., and Shawn J. Leroux. 2014. "Impact of Non-Native Terrestrial Mammals on the Structure of the Terrestrial Mammal Food Web of Newfoundland, Canada." PLOS ONE 9 (8): e106264. https://doi.org/10.1371/journal.pone.0106264\n\n\n\n\n2\n\n\n\n\nThessen AE. 2017. Biotic Interactions in Greenland. GloBI. 10.5281/zenodo.266824\n\n\n\n\n1\n\n\n\n\nBourlat SJ, Koch M, Kirse A, Langen K, Espeland M, Giebner H, Decher J, Ssymank A, Fonseca VG (2023) Metabarcoding dietary analysis in the insectivorous bat Nyctalus leisleri and implications for conservation. Biodiversity Data Journal 11: e111146. https://doi.org/10.3897/BDJ.11.e111146\n\n\n\n\n1\n\n\n\n\nCamargo-Sanabria, A.A., Fernández, J.A., Hernández-Quiroz, N.S., Buitrago-Torres, D.L. and Álvarez-Córdova, F. (2025), Ecological Interactions of Terrestrial Mammals in the Chihuahuan Desert: A Systematic Map. Mam Rev e70001. https://doi.org/10.1111/mam.70001\n\n\n\n\n1\n\n\n\n\nDe Rojas M, Doña J, Dimov I (2020) A comprehensive survey of Rhinonyssid mites (Mesostigmata: Rhinonyssidae) in Northwest Russia: New mite-host associations and prevalence data. Biodiversity Data Journal 8: e49535. https://doi.org/10.3897/BDJ.8.e49535\n\n\n\n\n1\n\n\n\n\nDeans, Andrew (2021). Catalog of Rose Gall, Herb Gall, and Inquiline Gall Wasps (Hymenoptera: Cynipidae) of the United States, Canada, and Mexico\n\n\n\n\n1\n\n\n\n\nGunther KA et al. 2014 Dietary breadth of grizzly bears in the Greater Yellowstone Ecosystem. Ursus 25(1):60-72\n\n\n\n\n1\n\n\n\n\nHiveTracks WorldFAIR Test Data.\n\n\n\n\n1\n\n\n\n\nSarah E Miller. 3/4/2015. Species associations manually extracted from http://onlinelibrary.wiley.com/doi/10.1111/j.1474-919X.2009.00907.x/suppinfo.\n\n\n\n\n1\n\n\n\n\nSarah E Miller. 5/21/2015. Text gathered from http://www.biodiversitylibrary.org/\n\n\n\n\n1\n\n\n\n\nVanderweyen A, Fraiture A, Groom Q, Desmet P, Reyserhove L (2019). Catalogue of the Rust Fungi of Belgium. Botanic Garden Meise.\n\n\n\n\n1\n\n\n\n\nVanderweyen, A., & Fraiture, A. (2009). Catalogue des Uredinales de Belgique, 1re partie, Chaconiaceae, Coleosporiaceae, Cronartiaceae, Melampsoraceae, Phragmidiaceae, Pucciniastraceae, Raveneliaceae et Uropyxidaceae. Lejeunia, Revue de Botanique|Vanderweyen, A., & Fraiture, A. (2009). Catalogue des Uredinales de Belgique, 2ème partie, Pucciniaceae (sauf Puccinia)(suite 2). Lejeunia, Revue de Botanique.|Vanderweyen, A., & Fraiture, A. (2012). CATALOGUE DES UREDINALES DE Belgique 3ème partie Pucciniaceae (genre Puccinia). Lejeunia, Revue de Botanique.\n\n\n\n\n1\n\n\n\n\nZeke Marshall. 2021. Species interactions manually extracted from literature.\n\n\n\n\n\n\n \n\nReferences\n\nPoelen JH, Simons JD, Mungall CJ (2014). Global Biotic Interactions: An open infrastructure to share and analyze species-interaction datasets. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2014.08.005\n\nSeltmann KC, Allen J, Brown BV, Carper A, Engel MS, Franz N, Gilbert E, Grinter C, Gonzalez VH, Horsley P, Lee S, Maier C, Miko I, Morris P, Oboyski P, Pierce NE, Poelen J, Scott VL, Smith M, Talamas EJ, Tsutsui ND, Tucker E (2021) Announcing Big-Bee: An initiative to promote understanding of bees through image and trait digitization. Biodiversity Information Science and Standards 5: e74037. https://doi.org/10.3897/biss.5.74037\n\nPoelen, JS & Seltmann, KS (2024) Bees Only Please: Bees Only Please: Selecting Hundreds of Thousands of Possible Bee Interactions Using a Laptop, Open Datasets, and Small (but Mighty) Commandline Tools. https://www.globalbioticinteractions.org/2024/06/07/bees-only-please\n\nAscher, J. S. and J. Pickering (2020) Discover Life bee species guide and world checklist (Hymenoptera: Apoidea: Anthophila). http://www.discoverlife.org/mp/20q?guide=Apoidea_species.\n\nAcknowledgements\n\nThis project is supported by the National Science Foundation. Award numbers: DBI:2102006, DBI:2101929, DBI:2101908, DBI:2101876, DBI:2101875, DBI:2101851, DBI:2101345, DBI:2101913, DBI:2101891 and DBI:2101850 "],"Other":["Please cite the resources, natural history collections and publications where the data originated as found in uniq_citations.tsv file above. Also, please cite Poelen et. al (above in References) to cite Global Biotic Interactions."]} 
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