An official website of the United States government
Computing strongly connected components (SCC) is among the most fundamental problems in graph analytics. Given the large size of today's real-world graphs, parallel SCC implementation is increasingly important. SCC is challenging in the parallel setting and is particularly hard on large-diameter graphs. Many existing parallel SCC implementations can be even slower than Tarjan's sequential algorithm on large-diameter graphs. To tackle this challenge, we propose an efficient parallel SCC implementation using a new parallel reachability approach. Our solution is based on a novel idea referred to as vertical granularity control (VGC). It breaks the synchronization barriers to increase parallelism and hide scheduling overhead. To use VGC in our SCC algorithm, we also design an efficient data structure called the parallel hash bag. It uses parallel dynamic resizing to avoid redundant work in maintaining frontiers (vertices processed in a round). We implement the parallel SCC algorithm by Blelloch et al. (J. ACM, 2020) using our new parallel reachability approach. We compare our implementation to the state-of-the-art systems, including GBBS, iSpan, Multi-step, and our highly optimized Tarjan's (sequential) algorithm, on 18 graphs, including social, web, k-NN, and lattice graphs. On a machine with 96 cores, our implementation is the fastest on 16 out of 18 graphs. On average (geometric means) over all graphs, our SCC is 6.0× faster than the best previous parallel code (GBBS), 12.8× faster than Tarjan's sequential algorithms, and 2.7× faster than the best existing implementation on each graph. We believe that our techniques are of independent interest. We also apply our parallel hash bag and VGC scheme to other graph problems, including connectivity and least-element lists (LE-lists). Our implementations improve the performance of the state-of-the-art parallel implementations for these two problems.
more »
« less
A Distributed Algorithm for Identifying Strongly Connected Components on Incremental Graphs
Incremental graphs that change over time capture the changing relationships of different entities. Given that many real-world networks are extremely large, it is often necessary to partition the network over many distributed systems and solve a complex graph problem over the partitioned network. This paper presents a distributed algorithm for identifying strongly connected components (SCC) on incremental graphs. We propose a two-phase asynchronous algorithm that involves storing the intermediate results between each iteration of dynamic updates in a novel meta-graph storage format for efficient recomputation of the SCC for successive iterations. To the best of our knowledge, this is the first attempt at identifying SCC for incremental graphs across distributed compute nodes. Our experimental analysis on real and synthesized graphs shows up to 2.8x performance improvement over the state-of-the-art by reducing the overall memory utilized and improving the communication bandwidth.
more »
« less
- PAR ID:
- 10537834
- Publisher / Repository:
- IEEE
- Date Published:
- ISBN:
- 979-8-3503-0548-7
- Page Range / eLocation ID:
- 109 to 118
- Format(s):
- Medium: X
- Location:
- Porto Alegre, Brazil
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
This work presents inGRASS, a novel algorithm designed for incremental spectral sparsification of large undirected graphs. The proposed inGRASS algorithm is highly scalable and parallel-friendly, having a nearly linear time complexity for the setup phase and the ability to update the spectral sparsifier in O(logN) time for each incremental change made to the original graph with N nodes. A key component in the setup phase of inGRASS is a multilevel resistance embedding framework introduced for efficiently identifying spectrally-critical edges and effectively detecting redundant ones, which is achieved by decomposing the initial sparsifier into many node clusters with bounded effective-resistance diameters leveraging a low-resistance-diameter decomposition (LRD) scheme. The update phase of inGRASS exploits low-dimensional node embedding vectors for efficiently estimating the importance and uniqueness of each newly added edge. As demonstrated through extensive experiments, inGRASS achieves up to over 200× speedups while retaining comparable solution quality in incremental spectral sparsification of graphs obtained from various datasets, such as circuit simulations, finite element analysis, and social networks.more » « less
-
null (Ed.)There has been significant recent interest in parallel graph processing due to the need to quickly analyze the large graphs available today. Many graph codes have been designed for distributed memory or external memory. However, today even the largest publicly-available real-world graph (the Hyperlink Web graph with over 3.5 billion vertices and 128 billion edges) can fit in the memory of a single commodity multicore server. Nevertheless, most experimental work in the literature report results on much smaller graphs, and the ones for the Hyperlink graph use distributed or external memory. Therefore, it is natural to ask whether we can efficiently solve a broad class of graph problems on this graph in memory. This paper shows that theoretically-efficient parallel graph algorithms can scale to the largest publicly-available graphs using a single machine with a terabyte of RAM, processing them in minutes. We give implementations of theoretically-efficient parallel algorithms for 20 important graph problems. We also present the interfaces, optimizations, and graph processing techniques that we used in our implementations, which were crucial in enabling us to process these large graphs quickly. We show that the running times of our implementations outperform existing state-of-the-art implementations on the largest real-world graphs. For many of the problems that we consider, this is the first time they have been solved on graphs at this scale. We have made the implementations developed in this work publicly-available as the Graph Based Benchmark Suite (GBBS).more » « less
-
Dyck-reachability is a fundamental formulation for program analysis, which has been widely used to capture properly-matched-parenthesis program properties such as function calls/returns and field writes/reads. Bidirected Dyck-reachability is a relaxation of Dyck-reachability on bidirected graphs where each edge u → ( i v labeled by an open parenthesis “( i ” is accompanied with an inverse edge v → ) i u labeled by the corresponding close parenthesis “) i ”, and vice versa. In practice, many client analyses such as alias analysis adopt the bidirected Dyck-reachability formulation. Bidirected Dyck-reachability admits an optimal reachability algorithm. Specifically, given a graph with n nodes and m edges, the optimal bidirected Dyck-reachability algorithm computes all-pairs reachability information in O ( m ) time. This paper focuses on the dynamic version of bidirected Dyck-reachability. In particular, we consider the problem of maintaining all-pairs Dyck-reachability information in bidirected graphs under a sequence of edge insertions and deletions. Dynamic bidirected Dyck-reachability can formulate many program analysis problems in the presence of code changes. Unfortunately, solving dynamic graph reachability problems is challenging. For example, even for maintaining transitive closure, the fastest deterministic dynamic algorithm requires O ( n 2 ) update time to achieve O (1) query time. All-pairs Dyck-reachability is a generalization of transitive closure. Despite extensive research on incremental computation, there is no algorithmic development on dynamic graph algorithms for program analysis with worst-case guarantees. Our work fills the gap and proposes the first dynamic algorithm for Dyck reachability on bidirected graphs. Our dynamic algorithms can handle each graph update ( i.e. , edge insertion and deletion) in O ( n ·α( n )) time and support any all-pairs reachability query in O (1) time, where α( n ) is the inverse Ackermann function. We have implemented and evaluated our dynamic algorithm on an alias analysis and a context-sensitive data-dependence analysis for Java. We compare our dynamic algorithms against a straightforward approach based on the O ( m )-time optimal bidirected Dyck-reachability algorithm and a recent incremental Datalog solver. Experimental results show that our algorithm achieves orders of magnitude speedup over both approaches.more » « less
-
Nowadays, large-scale graph data is being generated in a variety of real-world applications, from social networks to co-authorship networks, from protein-protein interaction networks to road traffic networks. Many existing works on graph mining focus on the vertices and edges, with the first-order Markov chain as the underlying model. They fail to explore the high-order network structures, which are of key importance in many high impact domains. For example, in bank customer personally identifiable information (PII) networks, the star structures often correspond to a set of synthetic identities; in financial transaction networks, the loop structures may indicate the existence of money laundering. In this paper, we focus on mining user-specified high-order network structures and aim to find a structure-rich subgraph which does not break many such structures by separating the subgraph from the rest. A key challenge associated with finding a structure-rich subgraph is the prohibitive computational cost. To address this problem, inspired by the family of local graph clustering algorithms for efficiently identifying a low-conductance cut without exploring the entire graph, we propose to generalize the key idea to model high-order network structures. In particular, we start with a generic definition of high-order conductance, and define the high-order diffusion core, which is based on a high-order random walk induced by user-specified high-order network structure. Then we propose a novel High-Order Structure-Preserving LOcal Cut (HOSPLOC) algorithm, which runs in polylogarithmic time with respect to the number of edges in the graph. It starts with a seed vertex and iteratively explores its neighborhood until a subgraph with a small high-order conductance is found. Furthermore, we analyze its performance in terms of both effectiveness and efficiency. The experimental results on both synthetic graphs and real graphs demonstrate the effectiveness and efficiency of our proposed HOSPLOC algorithm.more » « less
- Free Publicly Accessible Full Text
-
Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.1109/SBAC-PAD59825.2023.00020
